Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS29240 and PFLU_RS29245 are separated by 28 nucleotidesPFLU_RS29245 and PFLU_RS29250 are separated by 131 nucleotidesPFLU_RS29250 and PFLU_RS29255 are separated by 2 nucleotidesPFLU_RS29255 and PFLU_RS31215 are separated by 238 nucleotides PFLU_RS29240: PFLU_RS29240 - class I adenylate cyclase, at 6,497,609 to 6,500,449 _RS29240 PFLU_RS29245: PFLU_RS29245 - nucleoside diphosphate kinase regulator, at 6,500,478 to 6,500,888 _RS29245 PFLU_RS29250: PFLU_RS29250 - DUF1289 domain-containing protein, at 6,501,020 to 6,501,238 _RS29250 PFLU_RS29255: PFLU_RS29255 - iron donor protein CyaY, at 6,501,241 to 6,501,573 _RS29255 PFLU_RS31215: PFLU_RS31215 - hypothetical protein, at 6,501,812 to 6,501,982 _RS31215
Group Condition PFLU_RS29240 PFLU_RS29245 PFLU_RS29250 PFLU_RS29255 PFLU_RS31215
stress Betaine (C)(N); with TAPS; with chloride -0.1 -0.0 -1.5 -0.5 -3.4
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.2 -0.3 -1.5 -2.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.1 -0.5 -2.1 -1.7
no stress control Glycine betaine (C)(N); with MOPS +0.0 -0.4 -1.1 -0.1 -3.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -0.6 -0.8 -0.1 -2.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.0 -0.6 -0.8 -0.6 -2.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.1 -0.1 +0.8 -0.1 -4.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 -0.4 -0.5 -0.9 -2.2
no stress control Glycine betaine (C)(N); with TAPS -0.2 -0.6 -0.8 -1.0 -1.4
stress Betaine (C)(N); with MOPS; with chloride -0.3 +0.0 -2.0 -1.1 -0.6
carbon source Betaine 10 mM (C) +0.0 -0.0 -1.3 -2.4 -0.0
no stress control Betaine (C)(N); with TAPS +0.1 +0.0 -0.4 -2.5 -0.7
carbon source propionate 20 mM (C) -0.1 -0.5 -0.3 -2.7 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +0.0 +0.1 +0.2 -3.8
carbon source Shikimic Acid (C) -0.1 +0.2 -0.0 -1.3 -2.0
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.3 -1.3 +0.0 -2.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.8 +0.4 +1.0 -3.5
carbon source L-Valine 10 mM (C) -0.0 +0.1 +0.5 -3.0 -0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.1 -3.1 +0.9 -0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -0.8 -1.4 +0.5 -1.2
carbon source acetate 30 mM (C) -0.0 +0.6 +0.4 -2.3 -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.1 -0.3 +0.6 -0.5 -2.4
carbon source L-Carnitine (C) -0.1 -0.5 +0.4 -3.0 +0.8
temperature Growth at 25C -0.1 -0.4 +0.5 +0.5 -2.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.2 +0.3 +0.3 +0.4 -2.8
nitrogen source nitrate (N); with MOPS -0.0 +0.0 +0.3 +0.5 -2.7
carbon source p-Coumaric (C) 5 mM -0.0 +0.5 -0.1 +0.5 -2.6
carbon source acetate 30 mM (C) -0.2 -0.3 +0.6 -1.6 +0.9
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.0 +0.4 -1.1 +1.4 -1.1
carbon source Inosine (C) +0.1 -0.7 -1.6 +0.5 +2.0
remove
PFLU_RS29240
plot		 remove
PFLU_RS29245
plot		 remove
PFLU_RS29250		 remove
PFLU_RS29255
plot		 remove
PFLU_RS31215
plot