Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29075 and PFLU_RS29080 are separated by 136 nucleotidesPFLU_RS29080 and PFLU_RS29085 are separated by 133 nucleotidesPFLU_RS29085 and PFLU_RS29090 are separated by 365 nucleotidesPFLU_RS29090 and PFLU_RS29095 are separated by 220 nucleotides PFLU_RS29075: PFLU_RS29075 - fimbria/pilus outer membrane usher protein, at 6,463,292 to 6,465,679 _RS29075 PFLU_RS29080: PFLU_RS29080 - fimbria/pilus periplasmic chaperone, at 6,465,816 to 6,466,514 _RS29080 PFLU_RS29085: PFLU_RS29085 - DUF1120 domain-containing protein, at 6,466,648 to 6,467,298 _RS29085 PFLU_RS29090: PFLU_RS29090 - exopolyphosphatase, at 6,467,664 to 6,469,244 _RS29090 PFLU_RS29095: PFLU_RS29095 - polyphosphate kinase 1, at 6,469,465 to 6,471,687 _RS29095
Group Condition PFLU_RS29075 PFLU_RS29080 PFLU_RS29085 PFLU_RS29090 PFLU_RS29095
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 -0.1 +0.1 -1.6 -6.2
temperature Growth at 34C +0.0 -0.0 +0.2 -1.5 -6.1
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 +0.1 -0.1 -1.5 -5.8
temperature Growth at 34C -0.1 -0.1 +0.0 -1.2 -5.7
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 -0.0 -0.0 -1.7 -5.3
stress malate (C) and Ammonium chloride (N); with TAPS -0.0 +0.1 +0.0 -1.2 -5.9
temperature Growth at 34C -0.0 -0.1 +0.1 -0.8 -6.1
stress malate (C) and Ammonium chloride (N); with MOPS -0.0 -0.0 -0.1 -0.9 -5.8
carbon and nitrogen source NAG carbon and (N) +0.1 -0.1 -0.2 -1.3 -5.2
carbon source NAG (C) -0.2 +0.4 -0.3 -1.1 -5.5
stress malate (C) and Ammonium chloride (N); with MOPS +0.1 -0.0 -0.1 -0.9 -5.7
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.0 -0.0 +0.1 -1.2 -5.4
stress malate (C) and Ammonium chloride (N); with MOPS -0.0 -0.2 +0.1 -0.5 -5.9
nitrogen source nitrite (N) +0.1 -0.0 +0.1 -0.9 -5.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.0 +0.2 -0.0 -6.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -0.1 -0.2 +0.2 -6.2
temperature shift Temperature shift 10_to_30 -0.1 +0.1 -0.0 -1.7 -4.4
carbon source NAG (C) +0.1 +0.1 +0.3 -1.0 -5.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.1 +0.1 +0.1 -6.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 +0.2 -0.3 +0.2 -6.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.0 +0.2 -1.5 -4.6
stress malate (C) and Ammonium chloride (N); with TAPS -0.1 +0.3 -0.1 +0.6 -6.4
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.0 +0.1 +0.2 -0.9 -5.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 +0.3 -0.0 -0.1 -5.8
carbon source acetate (C) -0.2 +0.1 +0.3 -0.8 -5.0
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 +0.1 +0.0 +0.5 -6.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.1 -0.1 +0.3 -5.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 +0.3 -0.6 +0.9 -5.8
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 -0.1 +0.0 +0.6 -5.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 +0.1 +0.1 +1.0 -6.1
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