Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS28490 and PFLU_RS28495 are separated by 28 nucleotidesPFLU_RS28495 and PFLU_RS28500 are separated by 82 nucleotidesPFLU_RS28500 and PFLU_RS28505 are separated by 103 nucleotidesPFLU_RS28505 and PFLU_RS28510 are separated by 272 nucleotides PFLU_RS28490: PFLU_RS28490 - coniferyl aldehyde dehydrogenase, at 6,337,796 to 6,339,223 _RS28490 PFLU_RS28495: PFLU_RS28495 - hypothetical protein, at 6,339,252 to 6,339,797 _RS28495 PFLU_RS28500: PFLU_RS28500 - GMC family oxidoreductase, at 6,339,880 to 6,341,475 _RS28500 PFLU_RS28505: PFLU_RS28505 - pantetheine-phosphate adenylyltransferase, at 6,341,579 to 6,342,058 _RS28505 PFLU_RS28510: PFLU_RS28510 - YfhL family 4Fe-4S dicluster ferredoxin, at 6,342,331 to 6,342,582 _RS28510
Group Condition PFLU_RS28490 PFLU_RS28495 PFLU_RS28500 PFLU_RS28505 PFLU_RS28510
carbon source Xanthosine (C) -0.4 -0.2 -0.2 N.D. N.D.
temperature Growth at 25C -0.2 -0.3 -0.3 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.2 -0.8 -0.0 N.D. N.D.
pH Growth at pH7 and (C) D-Glucose -0.3 +0.0 -0.4 N.D. N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -0.5 -0.1 N.D. N.D.
carbon source L-Isoleucine (C) -0.1 -0.4 -0.1 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride +0.0 -0.7 +0.0 N.D. N.D.
carbon source L-Carnitine (C) +0.2 -0.6 -0.1 N.D. N.D.
stress L-Glutamine (C)(N); with MOPS; with chloride +0.1 -0.7 +0.1 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.4 +0.2 N.D. N.D.
carbon source m-Inositol (C) +0.2 -0.5 -0.0 N.D. N.D.
carbon source L-Valine (C) -0.2 +0.5 -0.2 N.D. N.D.
nitrogen source nitrate (N); with MOPS +0.1 +0.3 -0.3 N.D. N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 +0.3 +0.1 N.D. N.D.
no stress control Glycine betaine (C)(N); with TAPS +0.3 +0.2 -0.2 N.D. N.D.
carbon source Sucrose 5 mM (C) -0.0 +0.5 -0.2 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS +0.3 +0.3 -0.1 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +0.4 -0.2 N.D. N.D.
carbon source p-Coumaric (C) 5 mM -0.1 +0.4 +0.2 N.D. N.D.
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.2 +0.4 -0.1 N.D. N.D.
pH Growth at pH9 and (C) Trisodium citrate -0.0 +0.6 +0.1 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.0 +0.7 +0.0 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 +0.2 +0.3 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 -0.1 +0.5 N.D. N.D.
pH Growth at pH9 and (C) D-Glucose +0.2 +0.4 +0.1 N.D. N.D.
carbon source Citraconic 20 mM (C) +0.1 +0.3 +0.3 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.1 +0.6 +0.1 N.D. N.D.
carbon source Ferulic Acid (C) 1.5 mM +0.3 +0.4 +0.1 N.D. N.D.
carbon source acetate 30 mM (C) +0.3 +0.5 +0.0 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride +0.1 +0.3 +0.4 N.D. N.D.
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