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Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS28405 and PFLU_RS28410 are separated by 17 nucleotides
PFLU_RS28410 and PFLU_RS28415 are separated by 142 nucleotides
PFLU_RS28415 and PFLU_RS28420 are separated by 9 nucleotides
PFLU_RS28420 and PFLU_RS28425 are separated by 52 nucleotides
PFLU_RS28405: PFLU_RS28405 - radical SAM family heme chaperone HemW, at 6,322,212 to 6,323,414
_RS28405
PFLU_RS28410: PFLU_RS28410 - DUF3392 domain-containing protein, at 6,323,432 to 6,323,755
_RS28410
PFLU_RS28415: PFLU_RS28415 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 6,323,898 to 6,324,623
_RS28415
PFLU_RS28420: PFLU_RS28420 - thiazole synthase, at 6,324,633 to 6,325,427
_RS28420
PFLU_RS28425: PFLU_RS28425 - sulfur carrier protein ThiS, at 6,325,480 to 6,325,695
_RS28425
Group
Condition
PFLU
_RS28405
PFLU
_RS28410
PFLU
_RS28415
PFLU
_RS28420
PFLU
_RS28425
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.1
+0.1
-5.2
-5.0
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.1
+0.1
-4.6
-5.4
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.1
+0.0
-4.1
-4.9
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.1
+0.3
-4.1
-4.6
N.D.
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.1
-0.4
-3.0
-3.3
N.D.
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.2
-0.4
-2.2
-3.7
N.D.
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.3
-0.1
-2.7
-3.2
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.1
-0.2
-2.2
-3.4
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.3
-1.0
-1.4
-3.7
N.D.
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.3
-0.2
-3.9
-1.5
N.D.
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.2
+0.0
-4.4
-1.3
N.D.
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.3
+0.0
-1.7
-3.8
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.3
-0.3
-2.6
-3.2
N.D.
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.0
+0.2
-3.1
-2.9
N.D.
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.0
-0.2
-2.5
-3.0
N.D.
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.1
-0.1
-4.4
-1.1
N.D.
stress
Glucose (C) and Betaine (N); with TAPS; with chloride
-0.1
-0.2
-2.7
-2.7
N.D.
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.2
-0.2
-4.4
-0.6
N.D.
stress
Betaine (C)(N); with TAPS; with chloride
-0.2
-0.4
-4.3
-0.4
N.D.
stress
Glucose (C) and Betaine (N); with TAPS; with chloride
-0.3
+0.1
-3.3
-1.8
N.D.
carbon source
D,L-Malic Acid (C)
-0.3
-0.7
-0.4
-3.8
N.D.
stress
Betaine (C)(N); with TAPS; with chloride
+0.2
+0.1
-3.8
-1.7
N.D.
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.1
+0.3
-2.8
-2.7
N.D.
stress
Glucose (C) and Betaine (N); with TAPS; with chloride
-0.2
-0.2
-2.7
-2.0
N.D.
stress
Betaine (C)(N); with TAPS; with chloride
-0.1
+0.2
-4.5
-0.7
N.D.
stress
Glucose (C) and Betaine (N); with TAPS; with chloride
-0.0
+0.3
-3.6
-1.6
N.D.
stress
Betaine (C)(N); with TAPS; with chloride
-0.3
+0.1
-3.7
-1.1
N.D.
stress
Betaine (C)(N); with TAPS; with chloride
+0.0
+0.2
-4.2
-0.8
N.D.
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.1
+0.2
-2.5
-2.6
N.D.
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.3
+0.1
-0.9
-3.8
N.D.
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