Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS28190 and PFLU_RS28195 are separated by 273 nucleotidesPFLU_RS28195 and PFLU_RS28200 are separated by 51 nucleotidesPFLU_RS28200 and PFLU_RS28205 are separated by 30 nucleotidesPFLU_RS28205 and PFLU_RS28210 are separated by 24 nucleotides PFLU_RS28190: PFLU_RS28190 - cytochrome b, at 6,278,194 to 6,278,745 _RS28190 PFLU_RS28195: PFLU_RS28195 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 6,279,019 to 6,280,425 _RS28195 PFLU_RS28200: PFLU_RS28200 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 6,280,477 to 6,281,196 _RS28200 PFLU_RS28205: PFLU_RS28205 - transporter substrate-binding domain-containing protein, at 6,281,227 to 6,282,129 _RS28205 PFLU_RS28210: PFLU_RS28210 - RidA family protein, at 6,282,154 to 6,282,504 _RS28210
Group Condition PFLU_RS28190 PFLU_RS28195 PFLU_RS28200 PFLU_RS28205 PFLU_RS28210
carbon source p-Coumaric 2 mM (C) -0.4 -2.2 +0.6 +0.2 -2.9
carbon source L-Lactate (C) -0.2 -3.3 -0.1 +0.1 -0.7
carbon source L-Lactate (C) -0.2 -3.4 -0.4 +0.1 -0.2
carbon source gluconate 10 mM (C) -0.0 -3.5 -0.0 +0.1 -0.4
carbon source acetate 30 mM (C) +0.1 -2.6 +0.2 -0.1 -1.5
nitrogen source Urea (N); with MOPS -0.2 -2.6 +0.3 -0.1 -1.1
pH Growth at pH9 and (C) D-Glucose -0.6 -3.8 +0.1 -0.2 +0.7
carbon source D,L-Lactate (C) -0.2 -3.2 -0.4 +0.0 +0.3
carbon source propionate 20 mM (C) +0.4 -1.4 -0.7 +0.4 -1.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.1 -2.2 +0.4 -0.5 +0.2
temperature Growth at 25C -0.1 -2.6 +0.7 -0.2 -0.6
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.4 -2.9 +0.5 +0.2 -0.8
carbon source p-Coumaric (C) 5 mM +0.2 -2.8 +0.8 -0.0 -0.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 -2.0 +0.7 +0.1 -2.1
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM +0.3 -3.0 +0.7 +0.1 -0.6
carbon source Betaine 10 mM (C) +0.2 -1.4 +0.6 +0.3 -2.0
carbon source p-Coumaric (C) 5 mM +0.2 -3.0 +1.1 +0.3 -0.7
carbon source L-Valine 10 mM (C) -0.1 -1.5 +1.1 -0.1 -1.4
pH Growth at pH9 and (C) Trisodium citrate +0.0 -2.9 +0.9 +0.3 -0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 -2.8 +0.7 +0.1 -0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.5 -2.7 +0.6 -0.1 +0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -2.3 +0.9 +0.1 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.9 -1.8 +0.9 -0.2 +0.9
pH Growth at pH8 and (C) Trisodium citrate -0.2 -2.4 +0.6 +0.3 +0.7
carbon source 4-Aminobutyric (C) +0.3 -2.5 +0.8 +0.2 +0.5
carbon source p-Coumaric (C) 5 mM +0.1 -2.9 +1.0 +0.1 +1.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 -2.2 +0.6 -0.0 +0.7
carbon source p-Coumaric (C) 5 mM +0.2 -2.5 +1.2 +0.1 +0.7
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 -2.1 +0.9 +0.0 +0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -2.1 +0.9 -0.0 +0.8
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