Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS27940 and PFLU_RS27945 are separated by 13 nucleotidesPFLU_RS27945 and PFLU_RS27950 are separated by 224 nucleotidesPFLU_RS27950 and PFLU_RS27955 are separated by 95 nucleotidesPFLU_RS27955 and PFLU_RS27960 are separated by 531 nucleotides PFLU_RS27940: PFLU_RS27940 - L-carnitine dehydrogenase, at 6,219,463 to 6,220,428 _RS27940 PFLU_RS27945: PFLU_RS27945 - 4-hydroxybenzoyl-CoA thioesterase, at 6,220,442 to 6,220,942 _RS27945 PFLU_RS27950: PFLU_RS27950 - hypothetical protein, at 6,221,167 to 6,221,430 _RS27950 PFLU_RS27955: PFLU_RS27955 - GlxA family transcriptional regulator, at 6,221,526 to 6,222,629 _RS27955 PFLU_RS27960: PFLU_RS27960 - L-serine ammonia-lyase, at 6,223,161 to 6,224,537 _RS27960
Group Condition PFLU_RS27940 PFLU_RS27945 PFLU_RS27950 PFLU_RS27955 PFLU_RS27960
carbon source L-Carnitine 10 mM (C) -3.9 -4.2 +0.5 -3.3 -0.5
carbon source L-Carnitine 10 mM (C) -4.0 -3.6 +0.4 -3.5 -0.4
carbon source L-Carnitine 10 mM (C) -2.8 -3.7 +0.0 -3.2 -0.0
carbon source L-Carnitine 10 mM (C) -3.7 -3.3 -0.2 -2.0 +0.3
carbon source L-Carnitine 10 mM (C) -3.3 -3.1 -0.0 -1.8 +0.2
carbon source L-Carnitine 10 mM (C) -3.1 -3.2 +0.1 -1.7 +0.4
carbon source L-Carnitine (C) -2.6 -2.5 +0.7 -1.1 -0.2
carbon source L-Carnitine (C) -1.6 -1.7 +0.1 -1.6 -0.8
carbon source L-Carnitine (C) -1.5 -1.6 -0.5 -1.3 -0.6
carbon source Betaine 10 mM (C) +0.3 -0.4 -0.2 -4.8 -0.5
no stress control Glycine betaine (C)(N); with MOPS -0.1 +0.3 -0.1 -3.5 -1.9
no stress control Glycine betaine (C)(N); with MOPS -0.0 -0.0 +0.1 -3.5 -1.7
no stress control Betaine (C)(N); with MOPS +0.2 +0.0 -0.3 -3.7 -1.0
no stress control Betaine (C)(N); with MOPS -0.0 -0.1 +0.0 -3.5 -0.8
no stress control Glycine betaine (C)(N); with MOPS +0.2 +0.1 +0.1 -3.6 -1.2
carbon source Betaine 10 mM (C) +0.1 -0.2 +0.2 -3.9 -0.6
no stress control Betaine (C)(N); with TAPS +0.3 -0.0 +0.1 -3.7 -0.7
stress Betaine (C)(N); with MOPS; with chloride -0.3 +0.2 -0.3 -3.3 -0.3
no stress control Betaine (C)(N); with MOPS +0.2 +0.0 +0.1 -3.5 -0.7
stress Betaine (C)(N); with MOPS; with chloride -0.0 +0.3 -0.5 -2.9 -0.8
no stress control Betaine (C)(N); with TAPS -0.3 +0.2 +0.1 -3.3 -0.5
carbon source Choline chloride 10 mM (C) -0.0 +0.5 +0.4 -4.4 -0.3
stress Betaine (C)(N); with MOPS; with chloride +0.1 +0.1 +0.2 -2.6 -1.5
stress Betaine (C)(N); with MOPS; with chloride +0.0 +0.9 -0.1 -2.6 -1.9
no stress control Betaine (C)(N); with MOPS +0.0 +0.2 +0.3 -3.6 -0.6
stress Betaine (C)(N); with MOPS; with chloride -0.2 -0.3 +0.6 -3.0 -0.7
no stress control Glucose (C) and Betaine (N); with MOPS +0.3 +0.4 -0.1 -3.7 -0.0
carbon source Choline chloride 10 mM (C) +0.3 +0.2 +0.4 -3.5 -0.4
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.8 +0.5 -2.5 -1.5
stress Glucose (C) and Betaine (N); with MOPS; with chloride +0.2 +0.4 +0.3 -3.5 -0.1
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