Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS27835 and PFLU_RS27840 are separated by 176 nucleotidesPFLU_RS27840 and PFLU_RS27845 are separated by 111 nucleotidesPFLU_RS27845 and PFLU_RS27850 are separated by 276 nucleotidesPFLU_RS27850 and PFLU_RS27855 overlap by 4 nucleotides PFLU_RS27835: PFLU_RS27835 - low specificity L-threonine aldolase, at 6,194,911 to 6,195,951 _RS27835 PFLU_RS27840: PFLU_RS27840 - hypothetical protein, at 6,196,128 to 6,196,328 _RS27840 PFLU_RS27845: PFLU_RS27845 - NAD(P)-binding protein, at 6,196,440 to 6,198,257 _RS27845 PFLU_RS27850: PFLU_RS27850 - cytosine permease, at 6,198,534 to 6,199,979 _RS27850 PFLU_RS27855: PFLU_RS27855 - carbon-nitrogen hydrolase, at 6,199,976 to 6,200,791 _RS27855
Group Condition PFLU_RS27835 PFLU_RS27840 PFLU_RS27845 PFLU_RS27850 PFLU_RS27855
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -2.2 -0.0 +0.1 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.9 -1.4 -0.0 -0.1 -0.2
carbon source Ferulic Acid 2 mM (C) -0.6 -2.1 +0.1 +0.1 +0.3
carbon source D,L-Malic Acid (C) -0.8 -1.5 -0.0 +0.0 +0.3
no stress control L-Glutamine (C)(N); with TAPS -0.7 -0.9 +0.0 -0.0 -0.5
carbon source Phloretic Acid 2 mM (C) -0.1 -1.6 +0.1 +0.0 -0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -1.5 +0.2 -0.0 +0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.9 -0.9 +0.1 -0.0 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.3 -1.3 +0.3 +0.2 -0.3
no stress control Glycine betaine (C)(N); with TAPS +0.1 -1.3 +0.2 +0.1 -0.2
carbon source p-Coumaric (C) 5 mM -0.3 -1.1 +0.1 +0.3 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 -1.2 -0.2 +0.1 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.3 +0.1 +0.1 +0.1 +0.3
carbon source 4-Aminobutyric (C) +0.2 -1.2 +0.2 -0.2 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 +0.7 -0.0 -0.1 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -1.2 +0.2 +0.2 +0.1
stress Betaine (C)(N); with MOPS; with chloride -0.4 -0.7 +0.2 +0.4 +0.2
carbon source 4-Aminobutyric (C) +0.7 -0.6 +0.2 +0.0 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.4 +1.0 +0.2 -0.1 -0.6
stress Betaine (C)(N); with TAPS; with chloride +0.4 -1.1 +0.1 +0.3 +0.4
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.6 +0.9 +0.0 +0.2 +0.2
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.6 +0.2 +0.2 +0.5 +0.6
carbon source Phloretic Acid 2 mM (C) -0.2 +1.2 +0.2 +0.3 -0.0
carbon source 4-hydroxyphenylacetic 2 mM (C) -0.4 +1.2 +0.3 +0.3 +0.2
stress Betaine (C)(N); with MOPS; with chloride +0.1 +1.4 -0.0 +0.3 +0.1
carbon source 4-hydroxyphenylacetic 2 mM (C) +0.6 +0.5 +0.2 -0.0 +0.6
carbon source L-Valine 10 mM (C) +2.2 -0.1 -0.2 +0.2 -0.0
carbon source L-Valine 10 mM (C) +1.9 -0.1 -0.0 +0.1 +0.4
carbon source L-Valine 10 mM (C) +1.9 +0.2 +0.2 +0.1 -0.1
carbon source Phloretic Acid 2 mM (C) +0.5 +1.5 +0.1 +0.3 +0.7
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