Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS27455 and PFLU_RS27460 overlap by 4 nucleotidesPFLU_RS27460 and PFLU_RS27465 overlap by 4 nucleotidesPFLU_RS27465 and PFLU_RS27470 are separated by 106 nucleotidesPFLU_RS27470 and PFLU_RS27475 overlap by 1 nucleotides PFLU_RS27455: PFLU_RS27455 - molecular chaperone SurA, at 6,107,490 to 6,108,830 _RS27455 PFLU_RS27460: PFLU_RS27460 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 6,108,827 to 6,109,816 _RS27460 PFLU_RS27465: PFLU_RS27465 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 6,109,813 to 6,110,625 _RS27465 PFLU_RS27470: PFLU_RS27470 - Co2+/Mg2+ efflux protein ApaG, at 6,110,732 to 6,111,112 _RS27470 PFLU_RS27475: PFLU_RS27475 - symmetrical bis(5'-nucleosyl)-tetraphosphatase, at 6,111,112 to 6,111,963 _RS27475
Group Condition PFLU_RS27455 PFLU_RS27460 PFLU_RS27465 PFLU_RS27470 PFLU_RS27475
carbon source NAG (C) N.D. N.D. -3.0 -0.1 -4.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. -2.4 -0.1 -3.4
carbon source NAG (C) N.D. N.D. -1.8 -0.3 -3.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.5 -0.0 -2.3
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride N.D. N.D. -3.2 -0.1 -2.3
stress L-Glutamine (C)(N); with TAPS; with chloride N.D. N.D. -3.3 -0.0 -2.2
stress malate (C) and Ammonium chloride (N); with MOPS N.D. N.D. -1.9 -0.1 -3.5
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride N.D. N.D. -3.4 -0.0 -2.1
stress L-Glutamine (C)(N); with MOPS; with chloride N.D. N.D. -3.3 -0.2 -2.0
stress malate (C) and Ammonium chloride (N); with MOPS N.D. N.D. -2.1 -0.1 -3.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.3 -0.3 -1.9
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride N.D. N.D. -3.0 -0.1 -2.3
stress L-Glutamine (C)(N); with MOPS; with chloride N.D. N.D. -3.2 -0.1 -2.0
carbon source D-Xylose (C) N.D. N.D. -1.1 -0.0 -4.1
stress L-Glutamine (C)(N); with MOPS; with chloride N.D. N.D. -3.3 +0.2 -2.1
stress malate (C) and Ammonium chloride (N); with MOPS N.D. N.D. -1.6 -0.1 -3.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -4.0 +0.6 -1.7
stress L-Glutamine (C)(N); with TAPS; with chloride N.D. N.D. -3.2 +0.1 -2.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. -1.6 +0.1 -3.6
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride N.D. N.D. -2.8 -0.2 -2.1
carbon source D-Xylose (C) N.D. N.D. -1.2 -0.2 -3.7
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride N.D. N.D. -2.8 -0.0 -2.1
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -2.1 +0.0 -2.9
stress Sucrose (C) and L-Glutamine (N); with TAPS N.D. N.D. -1.8 -0.2 -3.0
stress malate (C) and Ammonium chloride (N); with MOPS N.D. N.D. -1.3 +0.0 -3.6
stress L-Glutamine (C)(N); with TAPS; with chloride N.D. N.D. -3.0 +0.2 -2.1
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. -3.2 +0.2 -1.7
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM N.D. N.D. -2.6 +0.2 -2.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs N.D. N.D. -2.8 +0.3 -1.9
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. -2.6 +0.5 -2.1
remove
PFLU_RS27455
plot		 remove
PFLU_RS27460
plot		 remove
PFLU_RS27465		 remove
PFLU_RS27470
plot		 remove
PFLU_RS27475
plot