Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS26970 and PFLU_RS26975 overlap by 4 nucleotidesPFLU_RS26975 and PFLU_RS26980 overlap by 11 nucleotidesPFLU_RS26980 and PFLU_RS26985 are separated by 65 nucleotidesPFLU_RS26985 and PFLU_RS26990 overlap by 11 nucleotides PFLU_RS26970: PFLU_RS26970 - endonuclease/exonuclease/phosphatase family protein, at 6,019,407 to 6,020,186 _RS26970 PFLU_RS26975: PFLU_RS26975 - cardiolipin synthase ClsB, at 6,020,183 to 6,021,445 _RS26975 PFLU_RS26980: PFLU_RS26980 - UPF0104 family protein, at 6,021,435 to 6,022,391 _RS26980 PFLU_RS26985: PFLU_RS26985 - alpha/beta fold hydrolase, at 6,022,457 to 6,023,212 _RS26985 PFLU_RS26990: PFLU_RS26990 - DUF3182 family protein, at 6,023,202 to 6,024,311 _RS26990
Group Condition PFLU_RS26970 PFLU_RS26975 PFLU_RS26980 PFLU_RS26985 PFLU_RS26990
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.2 -0.1 -2.2 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.8 +0.1 -0.2 -1.7 +0.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.1 +0.1 -1.7 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.2 -0.3 -0.3 -0.4
carbon source Shikimic Acid (C) -0.1 -0.1 -0.0 -0.8 -0.4
no stress control L-Glutamine (C)(N); with TAPS -0.3 -0.0 -0.0 -0.6 -0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 +0.1 -0.4 -1.1 +0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 +0.2 -0.3 -1.4 +0.5
carbon source Xanthosine 10 mM (C) -0.6 -0.3 +0.0 +0.4 -0.1
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.3 -0.3 +0.2 +0.1 -0.4
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.1 -0.1 +0.2 -0.8 +0.2
carbon source propionate 20 mM (C) +0.3 +0.2 -0.3 -0.7 -0.0
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.2 +0.2 -0.1 -0.7 -0.2
pH Growth at pH7 and (C) D-Glucose +0.6 +0.1 -0.2 -0.7 -0.1
carbon source Ferulic Acid 2 mM (C) +0.3 +0.2 +0.1 -0.8 -0.0
carbon source Phloretic Acid 2 mM (C) -0.1 -0.0 +0.3 +0.5 -0.6
carbon and nitrogen source NAG carbon and (N) +0.2 -0.0 +0.5 -0.5 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.3 +0.3 -0.6 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.0 -0.4 +0.2 -0.2 +0.6
no stress control Glycine betaine (C)(N); with MOPS +0.5 -0.2 -0.2 +0.3 -0.2
carbon source propionate 20 mM (C) +0.3 -0.3 +0.1 +0.3 -0.3
carbon source acetate 30 mM (C) +0.2 -0.2 -0.4 +0.4 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.1 +0.2 +0.1 -0.4 +0.5
pH Growth at pH9 and (C) Trisodium citrate +0.3 +0.1 +0.2 +0.2 -0.5
stress malate (C) and Ammonium chloride (N); with TAPS -0.5 +0.2 +0.2 +0.4 +0.1
stress Betaine (C)(N); with TAPS; with chloride +0.2 +0.3 +0.2 -0.3 +0.4
carbon source L-Carnitine (C) +0.2 -0.1 -0.1 +0.8 +0.1
carbon source L-Valine 10 mM (C) +0.4 +0.4 +0.5 -0.1 -0.0
nitrogen source nitrate (N); with MOPS +0.5 -0.1 +0.2 +0.7 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +0.1 +0.2 +0.6 +0.3
remove
PFLU_RS26970
plot		 remove
PFLU_RS26975
plot		 remove
PFLU_RS26980		 remove
PFLU_RS26985
plot		 remove
PFLU_RS26990
plot