Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26875 and PFLU_RS26880 are separated by 18 nucleotidesPFLU_RS26880 and PFLU_RS26885 overlap by 4 nucleotidesPFLU_RS26885 and PFLU_RS26890 are separated by 90 nucleotidesPFLU_RS26890 and PFLU_RS26895 are separated by 15 nucleotides PFLU_RS26875: PFLU_RS26875 - thiamine-phosphate kinase, at 5,998,989 to 5,999,954 _RS26875 PFLU_RS26880: PFLU_RS26880 - transcription antitermination factor NusB, at 5,999,973 to 6,000,473 _RS26880 PFLU_RS26885: PFLU_RS26885 - 6,7-dimethyl-8-ribityllumazine synthase, at 6,000,470 to 6,000,946 _RS26885 PFLU_RS26890: PFLU_RS26890 - bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II, at 6,001,037 to 6,002,128 _RS26890 PFLU_RS26895: PFLU_RS26895 - riboflavin synthase, at 6,002,144 to 6,002,806 _RS26895
Group Condition PFLU_RS26875 PFLU_RS26880 PFLU_RS26885 PFLU_RS26890 PFLU_RS26895
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. -4.1 N.D.
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -3.9 N.D.
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -3.8 N.D.
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -3.8 N.D.
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. -3.7 N.D.
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. -3.6 N.D.
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. -3.4 N.D.
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -3.4 N.D.
no stress control Glycine betaine (C)(N); with TAPS N.D. N.D. N.D. -3.2 N.D.
no stress control Glycine betaine (C)(N); with TAPS N.D. N.D. N.D. -3.2 N.D.
no stress control Glycine betaine (C)(N); with TAPS N.D. N.D. N.D. -3.2 N.D.
no stress control Glycine betaine (C)(N); with TAPS N.D. N.D. N.D. -3.1 N.D.
carbon source Choline chloride (C) N.D. N.D. N.D. -3.0 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -3.0 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.9 N.D.
carbon source Betaine 10 mM (C) N.D. N.D. N.D. -2.8 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.8 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.7 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.7 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.5 N.D.
carbon source Choline chloride (C) N.D. N.D. N.D. -2.5 N.D.
carbon source Choline chloride 10 mM (C) N.D. N.D. N.D. -2.4 N.D.
carbon source Choline chloride (C) N.D. N.D. N.D. -2.2 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.2 N.D.
no stress control Betaine (C)(N); with MOPS N.D. N.D. N.D. -2.0 N.D.
no stress control Betaine (C)(N); with TAPS N.D. N.D. N.D. -1.8 N.D.
carbon source Choline chloride 10 mM (C) N.D. N.D. N.D. -1.6 N.D.
carbon source L-Carnitine 10 mM (C) N.D. N.D. N.D. -1.5 N.D.
no stress control Glucose (C) and nitrate (N); with MOPS N.D. N.D. N.D. -1.4 N.D.
carbon source 4-hydroxyphenylacetic 2 mM (C) N.D. N.D. N.D. -1.4 N.D.
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