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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS26750 and PFLU_RS26755 are separated by 64 nucleotides
PFLU_RS26755 and PFLU_RS26760 overlap by 4 nucleotides
PFLU_RS26760 and PFLU_RS26765 are separated by 92 nucleotides
PFLU_RS26765 and PFLU_RS26770 are separated by 309 nucleotides
PFLU_RS26750: PFLU_RS26750 - ethanolamine permease, at 5,975,582 to 5,977,015
_RS26750
PFLU_RS26755: PFLU_RS26755 - ethanolamine ammonia-lyase subunit EutB, at 5,977,080 to 5,978,474
_RS26755
PFLU_RS26760: PFLU_RS26760 - ethanolamine ammonia-lyase subunit EutC, at 5,978,471 to 5,979,304
_RS26760
PFLU_RS26765: PFLU_RS26765 - GNAT family N-acetyltransferase, at 5,979,397 to 5,979,855
_RS26765
PFLU_RS26770: PFLU_RS26770 - DedA family protein, at 5,980,165 to 5,980,821
_RS26770
Group
Condition
PFLU
_RS26750
PFLU
_RS26755
PFLU
_RS26760
PFLU
_RS26765
PFLU
_RS26770
carbon source
acetate (C)
+0.0
-0.1
+0.1
-0.0
-4.7
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.3
+0.1
+0.0
-4.0
carbon and nitrogen source
NAG carbon and (N); with MOPS
+0.1
-0.1
-0.0
+0.1
-4.2
carbon source
acetate (C)
-0.1
-0.1
+0.1
-0.2
-3.7
pH
Growth at pH9 and (C) Trisodium citrate
-0.0
+0.5
+0.2
-0.1
-4.5
carbon source
NAG (C); with MOPS
-0.0
+0.1
+0.1
-0.0
-4.0
pH
Growth at pH9 and (C) D-Glucose
-0.0
-0.2
+0.0
+0.1
-3.8
carbon source
NAG (C)
+0.2
-0.0
+0.1
-0.0
-4.0
carbon and nitrogen source
NAG carbon and (N); with MOPS
+0.2
+0.1
+0.2
+0.0
-4.2
carbon source
NAG (C)
+0.0
+0.1
+0.1
+0.3
-4.2
nitrogen source
nitrite (N)
+0.0
-0.4
+0.1
-0.0
-3.5
carbon and nitrogen source
NAG carbon and (N)
-0.2
+0.3
+0.0
+0.1
-3.9
carbon source
L-Arabinose (C)
-0.1
-0.0
-0.1
-0.0
-3.4
carbon source
NAG (C); with MOPS
-0.1
+0.2
+0.0
-0.1
-3.6
carbon and nitrogen source
NAG carbon and (N); with MOPS
-0.0
-0.0
+0.1
+0.1
-3.7
pH
Growth at pH9 and (C) Trisodium citrate
+0.3
-0.1
-0.0
+0.4
-4.0
carbon source
acetate (C)
+0.1
-0.0
-0.0
+0.3
-3.8
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
-0.2
-0.5
-0.1
+0.2
-2.8
carbon and nitrogen source
NAG carbon and (N)
+0.2
+0.1
+0.1
-0.0
-3.8
carbon source
NAG (C); with MOPS
+0.1
-0.2
+0.1
+0.0
-3.4
pH
Growth at pH8 and (C) Trisodium citrate
-0.3
+0.1
+0.2
+0.1
-3.5
nitrogen source
NAG (N)
+0.1
-0.1
+0.0
+0.2
-3.5
nitrogen source
Urea (N)
-0.1
+0.1
+0.2
+0.0
-3.3
nitrogen source
Urea (N)
+0.0
+0.0
+0.1
+0.1
-3.3
carbon and nitrogen source
NAG carbon and (N)
-0.0
+0.2
+0.1
+0.1
-3.4
carbon source
NAG (C)
+0.0
+0.4
+0.1
+0.3
-3.7
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.1
+0.1
+0.3
-3.3
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.1
+0.2
+0.2
-3.6
nitrogen source
nitrite (N)
+0.1
+0.1
+0.1
+0.2
-3.4
carbon source
L-Arabinose (C)
-0.0
+0.1
+0.2
+0.0
-3.1
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