Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26665 and PFLU_RS26670 are separated by 69 nucleotidesPFLU_RS26670 and PFLU_RS26675 overlap by 1 nucleotidesPFLU_RS26675 and PFLU_RS26680 are separated by 175 nucleotidesPFLU_RS26680 and PFLU_RS26685 are separated by 64 nucleotides PFLU_RS26665: PFLU_RS26665 - ribosome silencing factor, at 5,959,348 to 5,959,842 _RS26665 PFLU_RS26670: PFLU_RS26670 - nicotinate-nucleotide adenylyltransferase, at 5,959,912 to 5,960,556 _RS26670 PFLU_RS26675: PFLU_RS26675 - glutamate-5-semialdehyde dehydrogenase, at 5,960,556 to 5,961,821 _RS26675 PFLU_RS26680: PFLU_RS26680 - DNA-3-methyladenine glycosylase, at 5,961,997 to 5,962,680 _RS26680 PFLU_RS26685: PFLU_RS26685 - phosphatase PAP2 family protein, at 5,962,745 to 5,964,061 _RS26685
Group Condition PFLU_RS26665 PFLU_RS26670 PFLU_RS26675 PFLU_RS26680 PFLU_RS26685
temperature shift Temperature shift 30_to_34 N.D. N.D. N.D. -0.1 -1.3
temperature shift Temperature shift 30_to_34 N.D. N.D. N.D. -0.2 -1.0
carbon source 4-Aminobutyric (C) N.D. N.D. N.D. -0.6 -0.3
temperature shift Temperature shift 30_to_34 N.D. N.D. N.D. -0.1 -0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. -0.1 -0.5
carbon source acetate 30 mM (C) N.D. N.D. N.D. -0.6 -0.0
carbon source Phloretic Acid 2 mM (C) N.D. N.D. N.D. -0.2 -0.4
stress Betaine (C)(N); with TAPS; with chloride N.D. N.D. N.D. -0.3 -0.2
carbon source Citraconic 20 mM (C) N.D. N.D. N.D. -0.3 +0.2
stress Betaine (C)(N); with TAPS; with chloride N.D. N.D. N.D. -0.3 +0.2
carbon source caffeic 2 mM (C) N.D. N.D. N.D. +0.3 -0.3
pH Growth at pH9 and (C) Trisodium citrate N.D. N.D. N.D. -0.3 +0.3
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. -0.4 +0.4
stress Betaine (C)(N); with TAPS; with chloride N.D. N.D. N.D. -0.3 +0.3
carbon source Ferulic Acid 2 mM (C) N.D. N.D. N.D. -0.3 +0.3
carbon source Ferulic Acid 2 mM (C) N.D. N.D. N.D. -0.2 +0.3
carbon source L-Valine (C) N.D. N.D. N.D. -0.2 +0.4
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -0.1 +0.5
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. -0.1 +0.5
carbon source 4-Guanidinobutyric (C) N.D. N.D. N.D. -0.1 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. -0.2 +0.6
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. -0.0 +0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. +0.2 +0.4
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. N.D. +0.1 +0.5
pH Growth at pH9 and (C) D-Glucose N.D. N.D. N.D. -0.0 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride N.D. N.D. N.D. +0.0 +0.6
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. +0.0 +0.7
carbon source L-Valine 10 mM (C) N.D. N.D. N.D. +0.2 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. +0.1 +0.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. +0.1 +0.9
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