Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26380 and PFLU_RS26385 are separated by 199 nucleotidesPFLU_RS26385 and PFLU_RS26390 are separated by 56 nucleotidesPFLU_RS26390 and PFLU_RS26395 are separated by 0 nucleotidesPFLU_RS26395 and PFLU_RS26400 are separated by 57 nucleotides PFLU_RS26380: PFLU_RS26380 - DMT family transporter, at 5,901,961 to 5,902,839 _RS26380 PFLU_RS26385: PFLU_RS26385 - hypothetical protein, at 5,903,039 to 5,903,452 _RS26385 PFLU_RS26390: PFLU_RS26390 - metallopeptidase, at 5,903,509 to 5,904,396 _RS26390 PFLU_RS26395: PFLU_RS26395 - hypothetical protein, at 5,904,397 to 5,905,386 _RS26395 PFLU_RS26400: PFLU_RS26400 - HAD family hydrolase, at 5,905,444 to 5,906,043 _RS26400
Group Condition PFLU_RS26380 PFLU_RS26385 PFLU_RS26390 PFLU_RS26395 PFLU_RS26400
pH Growth at pH7 and (C) D-Glucose -0.2 -0.3 -0.0 +0.2 -5.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.2 +0.1 +0.1 -2.5
carbon source succinate (C) -0.1 -0.2 +0.1 +0.0 -2.3
stress Betaine (C)(N); with TAPS; with chloride +0.1 -0.3 -0.1 -0.0 -2.0
stress L-Glutamine (C)(N); with TAPS; with chloride -0.2 -0.2 +0.0 +0.0 -1.9
stress Betaine (C)(N); with MOPS; with chloride +0.0 -0.5 -0.2 -0.2 -1.3
carbon source D-Glucuronic (C) -0.0 +0.0 +0.1 -0.0 -2.1
pH Growth at pH8 and (C) Trisodium citrate -0.1 -0.8 +0.6 +0.1 -1.6
carbon source 4-Hydroxyphenylpropionic (C) 5 mM -0.0 +0.2 -0.9 +0.2 -1.0
carbon source L-Valine 10 mM (C) -0.5 -1.2 +0.7 +0.2 -0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.1 +0.2 +0.0 -1.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -0.2 +0.4 -0.0 -1.8
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.1 -0.7 +0.9 +0.1 -1.4
nitrogen source NAG (N); with MOPS -0.3 -0.2 +0.7 -0.3 -1.0
carbon source Xanthosine (C) +0.0 +0.4 +0.3 -0.1 -1.7
carbon source pyruvate 20 mM (C) +0.4 +0.2 -0.4 -0.3 -1.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.4 +0.3 -0.9 +0.0 -0.7
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.3 +0.0 -1.4 +0.1 +0.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.1 -0.8 +0.5 +0.3 -1.0
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.0 -0.7 +0.9 +0.1 -1.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.4 +0.0 -0.8 +0.2 +0.8
carbon source p-Coumaric 2 mM (C) +0.4 -0.7 +0.7 +0.1 -0.5
carbon source 4-Guanidinobutyric (C) +0.2 -1.0 +0.2 -0.3 +1.0
carbon source caffeic 2 mM (C) +0.2 +0.6 -0.3 +0.4 -0.7
carbon source 4-hydroxyphenylacetic 2 mM (C) +0.2 -0.5 +1.1 +0.0 -0.5
carbon source Cytidine 10 mM (C) +0.6 +0.3 -0.9 +0.2 +0.5
carbon source propionate 20 mM (C) +0.0 -0.8 +0.6 +0.1 +0.9
carbon and nitrogen source NAG carbon and (N) +0.4 -0.2 -0.2 -0.4 +1.5
carbon source p-Coumaric (C) 5 mM +0.2 -0.3 -0.1 -0.2 +1.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.1 +0.7 +0.0 +0.0 +1.6
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