Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26355 and PFLU_RS26360 overlap by 4 nucleotidesPFLU_RS26360 and PFLU_RS26365 are separated by 134 nucleotidesPFLU_RS26365 and PFLU_RS26370 are separated by 77 nucleotidesPFLU_RS26370 and PFLU_RS26375 are separated by 221 nucleotides PFLU_RS26355: PFLU_RS26355 - type II 3-dehydroquinate dehydratase, at 5,896,342 to 5,896,791 _RS26355 PFLU_RS26360: PFLU_RS26360 - shikimate dehydrogenase, at 5,896,788 to 5,897,636 _RS26360 PFLU_RS26365: PFLU_RS26365 - TetR/AcrR family transcriptional regulator, at 5,897,771 to 5,898,412 _RS26365 PFLU_RS26370: PFLU_RS26370 - TIM barrel protein, at 5,898,490 to 5,900,391 _RS26370 PFLU_RS26375: PFLU_RS26375 - MFS transporter, at 5,900,613 to 5,901,947 _RS26375
Group Condition PFLU_RS26355 PFLU_RS26360 PFLU_RS26365 PFLU_RS26370 PFLU_RS26375
carbon source Quinic Acid 10 mM (C) -2.0 -2.1 -0.2 -1.8 -2.2
carbon source Quinic Acid 10 mM (C) -1.9 -2.2 -0.1 -1.9 -2.1
carbon source Shikimic Acid 10 mM (C) -1.7 -1.8 +1.0 -2.5 -2.9
carbon source Shikimic Acid 10 mM (C) -1.6 -1.9 +1.0 -2.2 -3.0
carbon source Shikimic Acid 10 mM (C) -1.5 -1.9 +1.1 -2.3 -3.1
carbon source Quinic Acid 10 mM (C) -1.5 -2.2 -0.3 -1.7 -2.0
carbon source Quinic Acid (C) -1.9 -1.4 +0.6 -1.6 -2.1
carbon source Shikimic Acid (C) -1.1 -1.5 +0.5 -1.3 -1.2
carbon source Shikimic Acid (C) -0.3 -0.9 +0.4 -0.8 -1.2
carbon source p-Coumaric 2 mM (C) -0.5 -0.4 -1.7 +0.2 -0.1
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.2 -0.2 -1.7 -0.2 +0.1
carbon source p-Coumaric (C) 5 mM -0.2 -0.4 -1.4 +0.1 -0.2
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.0 -0.5 -1.5 -0.0 -0.1
carbon source Phloretic Acid 2 mM (C) +0.0 +0.1 -2.2 -0.0 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.3 -1.4 -0.4 +0.2 +0.3
carbon source p-Coumaric (C) 5 mM +0.0 -0.2 -1.5 +0.0 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.7 +0.3 -0.5 +0.1 +0.1
carbon source Phloretic Acid 2 mM (C) +0.4 +0.6 -2.4 +0.1 -0.2
carbon source Phloretic Acid 2 mM (C) +0.2 +0.3 -2.2 +0.3 -0.0
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.1 +0.2 -1.6 +0.1 +0.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.2 +0.2 -1.4 -0.1 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 +0.2 -1.5 -0.1 +0.0
carbon source p-Coumaric 2 mM (C) +0.2 +0.3 -1.9 +0.2 +0.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.4 +0.2 -1.8 +0.6 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 +0.6 -0.9 -0.1 +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 -0.6 -1.5 +0.0 +2.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.2 +0.7 -0.5 -0.0 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.3 -0.2 -1.5 +0.0 +5.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 -0.0 -0.6 -0.0 +3.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 +0.3 -0.6 +0.1 +5.3
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