Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26170 and PFLU_RS26175 overlap by 4 nucleotidesPFLU_RS26175 and PFLU_RS26180 are separated by 258 nucleotidesPFLU_RS26180 and PFLU_RS26185 are separated by 163 nucleotidesPFLU_RS26185 and PFLU_RS26190 are separated by 116 nucleotides PFLU_RS26170: PFLU_RS26170 - elongation factor GreAB, at 5,850,026 to 5,850,514 _RS26170 PFLU_RS26175: PFLU_RS26175 - NADP-specific glutamate dehydrogenase, at 5,850,511 to 5,851,848 _RS26175 PFLU_RS26180: PFLU_RS26180 - energy-dependent translational throttle protein EttA, at 5,852,107 to 5,853,771 _RS26180 PFLU_RS26185: PFLU_RS26185 - threonine transporter RhtB, at 5,853,935 to 5,854,546 _RS26185 PFLU_RS26190: PFLU_RS26190 - bifunctional diguanylate cyclase/phosphodiesterase, at 5,854,663 to 5,858,514 _RS26190
Group Condition PFLU_RS26170 PFLU_RS26175 PFLU_RS26180 PFLU_RS26185 PFLU_RS26190
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.7 -1.1 -3.0 +0.0 -0.1
pH Growth at pH8 and (C) Trisodium citrate -2.3 -1.7 -0.6 -0.1 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.9 -1.1 -2.7 -0.1 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 -1.1 -3.2 -0.0 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -1.8 -1.7 -0.5 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.7 -1.1 -2.5 +0.1 -0.1
carbon source propionate 20 mM (C) -0.3 -0.7 -2.9 -0.0 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -1.5 -1.5 -0.3 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 -1.3 -3.1 +0.2 +0.0
carbon source Phloretic Acid 2 mM (C) -0.9 -0.4 -1.9 -0.3 -0.4
carbon source propionate 20 mM (C) -0.4 -0.5 -2.9 +0.3 -0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -1.2 -1.9 +0.1 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -0.5 -3.3 +0.3 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 -1.0 -2.8 +0.3 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.3 -2.7 +0.1 -0.1
carbon source 4-hydroxyphenylacetic 2 mM (C) -0.6 -0.6 -1.8 -0.1 -0.1
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.5 -1.1 -1.3 -0.2 -0.2
carbon source Phloretic Acid 2 mM (C) -0.7 -0.6 -1.7 +0.2 -0.3
carbon source propionate 20 mM (C) -0.2 -0.1 -2.9 +0.2 -0.1
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.9 -0.6 +0.2 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 -0.5 -0.8 +0.5 -0.3
carbon source L-Alanine 15 mM (C) -0.3 -2.2 +0.3 -0.2 +0.2
carbon source L-Alanine 15 mM (C) -0.2 -2.3 +0.4 -0.1 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.9 -0.4 +1.0 -0.8 -0.5
carbon source L-Ornithine 10 mM (C) -0.8 -0.2 +4.4 +0.2 -0.1
carbon source L-Ornithine 10 mM (C) +0.4 -0.5 +3.9 -0.0 +0.2
carbon source L-Ornithine (C) +0.1 -0.0 +3.7 -0.0 +0.2
carbon source L-Ornithine (C) -0.4 +0.2 +4.6 -0.1 +0.2
carbon source L-Ornithine 10 mM (C) +0.1 +0.0 +4.4 +0.1 +0.1
carbon source L-Ornithine (C) +0.0 -0.1 +4.4 +0.0 +0.3
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