Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS26120 and PFLU_RS26125 are separated by 130 nucleotidesPFLU_RS26125 and PFLU_RS26130 are separated by 146 nucleotidesPFLU_RS26130 and PFLU_RS26135 are separated by 15 nucleotidesPFLU_RS26135 and PFLU_RS26140 are separated by 163 nucleotides PFLU_RS26120: PFLU_RS26120 - HD domain-containing protein, at 5,836,250 to 5,837,200 _RS26120 PFLU_RS26125: PFLU_RS26125 - methyl-accepting chemotaxis protein, at 5,837,331 to 5,839,493 _RS26125 PFLU_RS26130: PFLU_RS26130 - phospholipid carrier-dependent glycosyltransferase, at 5,839,640 to 5,841,073 _RS26130 PFLU_RS26135: PFLU_RS26135 - TIGR00645 family protein, at 5,841,089 to 5,841,577 _RS26135 PFLU_RS26140: PFLU_RS26140 - hypothetical protein, at 5,841,741 to 5,843,564 _RS26140
Group Condition PFLU_RS26120 PFLU_RS26125 PFLU_RS26130 PFLU_RS26135 PFLU_RS26140
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.2 -0.2 -0.0 -0.7 -0.3
carbon source L-Carnitine (C) -0.0 -0.2 -0.1 -0.8 -0.4
carbon source Shikimic Acid (C) +0.1 +0.0 -0.1 -0.9 -0.5
stress Sucrose (C) and Glycine betaine (N); with MOPS -0.1 -0.1 -0.1 -0.7 -0.3
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.3 -0.2 -0.0 -0.8 +0.1
carbon source p-Coumaric 2 mM (C) -0.1 +0.2 -0.1 -0.8 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 +0.0 -0.2 -0.8 +0.2
carbon source propionate 20 mM (C) -0.4 -0.0 +0.1 -0.5 -0.3
nitrogen source NAG (N); with MOPS +0.3 +0.2 -0.0 -1.5 +0.1
nitrogen source NAG (N); with MOPS +0.1 -0.2 +0.1 -0.8 -0.1
nitrogen source nitrate (N); with MOPS +0.2 +0.1 -0.1 -0.9 -0.2
carbon source Phloretic Acid 2 mM (C) -0.1 +0.2 -0.3 -0.5 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 +0.0 +0.0 -1.0 +0.2
carbon source p-Coumaric (C) 5 mM -0.1 +0.2 +0.1 -0.6 -0.5
pH Growth at pH7 and (C) D-Glucose -0.1 -0.0 -0.1 -0.8 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.1 -0.3 -0.7 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.1 +0.0 -0.8 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 -0.2 +0.1 -1.0 +0.3
stress L-Glutamine (C)(N); with TAPS; with chloride -0.0 -0.0 +0.1 -0.8 +0.2
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.1 -0.1 +0.3 -0.6 +0.1
carbon source NAG (C) -0.1 -0.2 +0.2 -0.4 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 +0.3 +0.0 -0.7 +0.2
carbon source D-Mannitol (C) +0.1 +0.2 +0.1 -0.6 +0.2
carbon source p-Coumaric (C) 5 mM -0.2 +0.1 +0.1 +0.6 -0.6
carbon source L-Valine (C) +0.2 +0.2 +0.3 -0.6 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.0 +0.3 +0.5 -0.2 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.4 +0.1 +0.3 +0.5 +0.1
carbon source p-Coumaric (C) 5 mM +0.0 +0.3 +0.2 +0.6 -0.3
no stress control Glycine betaine (C)(N); with TAPS -0.0 +0.4 -0.3 +0.7 +0.0
carbon source 4-Aminobutyric (C) +0.0 +0.3 +0.1 +0.5 +0.5
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