Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS25945 and PFLU_RS25950 are separated by 69 nucleotidesPFLU_RS25950 and PFLU_RS25955 are separated by 150 nucleotidesPFLU_RS25955 and PFLU_RS25960 are separated by 674 nucleotidesPFLU_RS25960 and PFLU_RS25965 are separated by 140 nucleotides PFLU_RS25945: PFLU_RS25945 - L-lactate permease, at 5,793,200 to 5,794,894 _RS25945 PFLU_RS25950: PFLU_RS25950 - FAD-binding oxidoreductase, at 5,794,964 to 5,797,774 _RS25950 PFLU_RS25955: PFLU_RS25955 - hypothetical protein, at 5,797,925 to 5,798,203 _RS25955 PFLU_RS25960: PFLU_RS25960 - DUF4102 domain-containing protein, at 5,798,878 to 5,800,083 _RS25960 PFLU_RS25965: PFLU_RS25965 - damage-inducible protein, at 5,800,224 to 5,800,907 _RS25965
Group Condition PFLU_RS25945 PFLU_RS25950 PFLU_RS25955 PFLU_RS25960 PFLU_RS25965
carbon source Inosine (C) +0.2 -0.4 -5.6 -0.2 +0.3
carbon source Xanthosine (C) -0.7 +0.0 -4.3 +0.2 -0.4
carbon source D,L-Lactate 20 mM (C) -3.4 -1.5 -0.2 -0.0 -0.1
stress Betaine (C)(N); with MOPS; with chloride -0.1 -0.0 -4.7 -0.0 +0.2
carbon source Inosine (C) +0.1 +0.3 -5.3 +0.3 +0.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.1 +0.2 -4.1 -0.1 -0.3
stress Betaine (C)(N); with TAPS; with chloride +0.0 -0.1 -4.3 -0.0 +0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.5 -3.7 -0.1 +0.2
carbon source D,L-Lactate (C) -1.7 -0.8 -1.9 +0.1 +0.0
carbon source D,L-Lactate 20 mM (C) -2.9 -1.1 +0.1 +0.0 -0.1
carbon source D,L-Lactate (C) -3.1 -0.9 +0.0 +0.1 -0.0
no stress control Glycine betaine (C)(N); with MOPS -0.2 +0.3 -4.1 +0.1 +0.1
temperature Growth at 25C +0.1 +0.1 -4.3 +0.3 -0.0
carbon source D,L-Lactate (C) -2.8 -0.7 -0.3 +0.1 +0.0
no stress control L-Glutamine (C)(N); with TAPS +0.2 -0.1 -3.7 +0.0 +0.0
carbon source Quinic Acid (C) -0.4 +0.0 -3.1 -0.2 +0.2
temperature shift Temperature shift 10_to_21 +0.0 -0.1 -3.4 +0.2 +0.0
pH Growth at pH8 and (C) D-Glucose +0.2 +0.1 -3.5 -0.1 +0.0
carbon source D,L-Lactate (C) -2.2 -0.7 -0.5 +0.1 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.0 -0.1 -3.3 +0.2 -0.1
carbon source propionate 20 mM (C) -0.5 -0.2 -2.4 +0.1 -0.0
carbon source D,L-Malic Acid (C) -0.1 -0.1 -3.1 +0.2 -0.1
carbon source D,L-Lactate 20 mM (C) -2.0 -1.1 +0.0 +0.1 -0.1
carbon source Phloretic Acid 2 mM (C) -0.2 +0.2 -2.5 -0.1 -0.2
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS -0.3 -0.2 -2.5 +0.1 +0.1
carbon source L-Ornithine 10 mM (C) -0.2 +0.1 -2.7 +0.1 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.3 +0.4 -2.3 -0.1 -0.2
carbon source pyruvate (C) -0.2 +1.6 -1.0 +0.0 -0.1
carbon source pyruvate (C) -0.3 +2.3 -1.0 +0.1 -0.2
carbon source pyruvate (C) -0.1 +2.3 -0.5 -0.1 -0.0
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