Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS25100 and PFLU_RS25105 overlap by 1 nucleotidesPFLU_RS25105 and PFLU_RS25110 are separated by 67 nucleotidesPFLU_RS25110 and PFLU_RS25115 are separated by 0 nucleotidesPFLU_RS25115 and PFLU_RS25120 are separated by 182 nucleotides PFLU_RS25100: PFLU_RS25100 - exo-alpha-sialidase, at 5,611,507 to 5,612,775 _RS25100 PFLU_RS25105: PFLU_RS25105 - hypothetical protein, at 5,612,775 to 5,613,386 _RS25105 PFLU_RS25110: PFLU_RS25110 - LTA synthase family protein, at 5,613,454 to 5,615,475 _RS25110 PFLU_RS25115: PFLU_RS25115 - cytochrome c family protein, at 5,615,476 to 5,615,850 _RS25115 PFLU_RS25120: PFLU_RS25120 - response regulator, at 5,616,033 to 5,616,413 _RS25120
Group Condition PFLU_RS25100 PFLU_RS25105 PFLU_RS25110 PFLU_RS25115 PFLU_RS25120
carbon source D,L-Malic Acid (C) +0.3 -0.1 +0.0 -0.5 -4.3
stress Betaine (C)(N); with TAPS; with chloride -0.3 +0.2 -0.0 -1.9 -2.7
pH Growth at pH9 and (C) Trisodium citrate -0.4 +0.4 +0.1 -0.8 -2.9
carbon source Ferulic Acid 2 mM (C) -0.2 -0.3 +0.3 -1.1 -2.1
carbon source Inosine (C) +0.0 -0.1 -0.3 -0.4 -2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.2 -0.2 -1.5 -1.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 -0.5 +0.3 -0.6 -1.1
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.0 +0.0 +0.2 -0.7 -2.2
stress Betaine (C)(N); with MOPS; with chloride -0.4 -0.7 +0.0 -1.0 -0.5
no stress control Sucrose (C) and Glycine betaine (N); with TAPS -0.0 -0.1 +0.0 -0.7 -1.8
carbon source Xanthosine (C) +0.2 +0.2 +0.3 -1.5 -1.6
carbon source L-Valine 10 mM (C) -0.2 +0.2 +0.1 -1.1 -1.4
stress L-Glutamine (C)(N); with TAPS; with chloride +0.0 +0.1 +0.0 -0.5 -1.9
carbon source Quinic Acid (C) +0.2 -0.1 +0.0 +0.4 -2.6
pH Growth at pH9 and (C) Trisodium citrate +0.4 -0.2 +0.0 -0.4 -1.5
stress Betaine (C)(N); with TAPS; with chloride -0.0 -0.3 +0.0 -1.9 +0.5
carbon source Inosine 10 mM (C) +0.2 +0.2 -0.0 -0.3 -1.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 +0.2 +0.2 -0.1 -2.1
temperature shift Temperature shift 10_to_25; with MOPS +0.1 -0.2 -0.1 -1.7 +0.5
carbon source p-Coumaric (C) 5 mM +0.2 +0.2 +0.2 -2.7 +1.0
pH Growth at pH8 and (C) Trisodium citrate +0.3 +0.5 +0.1 -0.1 -1.8
stress Growth with Chloride 200 mM; with MOPS +0.1 +0.2 +0.1 +0.6 -2.0
stress Betaine (C)(N); with MOPS; with chloride +0.3 +0.6 -0.3 +0.4 -1.3
carbon source NAG (C) -0.1 +0.5 -0.0 +0.7 -1.4
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +0.3 +0.0 +0.8 -1.4
carbon source NAG (C) +0.3 +0.2 +0.1 -1.3 +1.4
carbon source 4-Guanidinobutyric (C) +0.9 -0.6 +0.2 +0.5 +0.3
carbon source p-Coumaric (C) 5 mM +0.2 +0.4 +0.1 -0.8 +1.6
carbon and nitrogen source NAG carbon and (N) +0.0 -0.4 +0.1 +0.6 +1.7
carbon source p-Coumaric (C) 5 mM +0.0 +0.4 +0.1 -0.3 +1.9
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