Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS24415 and PFLU_RS24420 are separated by 4 nucleotidesPFLU_RS24420 and PFLU_RS24425 are separated by 187 nucleotidesPFLU_RS24425 and PFLU_RS24430 overlap by 11 nucleotidesPFLU_RS24430 and PFLU_RS24435 are separated by 200 nucleotides PFLU_RS24415: PFLU_RS24415 - pH-inducible protein involved in stress response, at 5,471,015 to 5,471,734 _RS24415 PFLU_RS24420: PFLU_RS24420 - class I SAM-dependent methyltransferase, at 5,471,739 to 5,472,419 _RS24420 PFLU_RS24425: PFLU_RS24425 - HAMP domain-containing histidine kinase, at 5,472,607 to 5,473,887 _RS24425 PFLU_RS24430: PFLU_RS24430 - response regulator transcription factor, at 5,473,877 to 5,474,560 _RS24430 PFLU_RS24435: PFLU_RS24435 - LTA synthase family protein, at 5,474,761 to 5,476,710 _RS24435
Group Condition PFLU_RS24415 PFLU_RS24420 PFLU_RS24425 PFLU_RS24430 PFLU_RS24435
carbon source Shikimic Acid (C) +0.1 -0.9 -0.3 -1.1 -0.1
carbon source Shikimic Acid 10 mM (C) +0.0 +0.1 -1.3 -1.1 +0.1
carbon source Shikimic Acid 10 mM (C) +0.1 +0.0 -1.0 -1.3 +0.1
carbon source Shikimic Acid 10 mM (C) +0.1 -0.4 -0.8 -1.0 +0.1
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -0.3 +0.0 -0.3 -1.2 +0.2
carbon source Shikimic Acid (C) -0.4 -0.1 -0.6 -0.4 +0.2
nitrogen source nitrate (N); with MOPS -0.4 -0.6 -0.3 -0.2 +0.1
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -0.1 +0.1 -0.4 -1.0 +0.1
stress Growth with Chloride 200 mM +0.0 -0.2 -0.3 -0.9 +0.1
temperature Growth at 34C -0.6 +0.1 -0.3 -0.4 +0.1
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.3 -0.1 -1.0 -0.2 -0.1
temperature shift Temperature shift 30_to_34 +0.2 +0.0 -0.4 -0.8 +0.1
temperature shift Temperature shift 30_to_34 +0.3 +0.0 -0.6 -0.8 +0.1
stress Growth with Chloride 200 mM -0.3 +0.2 -0.4 -0.5 +0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 +0.6 +0.1 -1.0 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -0.2 +0.3 -0.8 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 -0.5 +0.3 -0.2 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.3 -0.8 +0.0 +0.5 +0.2
carbon source Xanthosine (C) -0.7 +0.4 -0.4 +0.6 -0.2
carbon source 4-Guanidinobutyric (C) -0.4 +0.8 -0.0 -0.2 -0.1
carbon source p-Coumaric (C) 5 mM -1.0 +0.5 +0.3 +0.7 -0.1
carbon source p-Coumaric (C) 5 mM -1.5 +0.6 +0.5 +0.9 +0.0
stress Betaine (C)(N); with TAPS; with chloride -0.1 +0.7 +0.2 -0.4 +0.1
carbon source p-Coumaric (C) 5 mM -0.8 +0.3 +0.4 +0.5 +0.1
carbon source L-Carnitine (C) +0.1 +0.6 +0.2 -0.4 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.1 +0.8 +0.6 -0.3 +0.1
carbon source p-Coumaric (C) 5 mM -0.5 +0.2 +0.6 +1.0 -0.1
no stress control Glycine betaine (C)(N); with MOPS -0.1 +0.9 -0.1 +0.4 +0.2
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG +1.2 -0.2 +0.1 +0.3 +0.0
carbon source Phloretic Acid 2 mM (C) +0.4 +0.7 -0.0 +0.7 +0.1
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