Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS24240 and PFLU_RS24245 are separated by 77 nucleotidesPFLU_RS24245 and PFLU_RS24250 are separated by 225 nucleotidesPFLU_RS24250 and PFLU_RS24255 are separated by 173 nucleotidesPFLU_RS24255 and PFLU_RS24260 are separated by 102 nucleotides PFLU_RS24240: PFLU_RS24240 - DUF58 domain-containing protein, at 5,426,930 to 5,428,261 _RS24240 PFLU_RS24245: PFLU_RS24245 - PilZ domain-containing protein, at 5,428,339 to 5,428,698 _RS24245 PFLU_RS24250: PFLU_RS24250 - hypothetical protein, at 5,428,924 to 5,429,298 _RS24250 PFLU_RS24255: PFLU_RS24255 - pyruvate kinase, at 5,429,472 to 5,430,923 _RS24255 PFLU_RS24260: PFLU_RS24260 - enoyl-CoA hydratase, at 5,431,026 to 5,431,775 _RS24260
Group Condition PFLU_RS24240 PFLU_RS24245 PFLU_RS24250 PFLU_RS24255 PFLU_RS24260
carbon source L-Ornithine 10 mM (C) +0.2 -3.8 +0.4 -0.5 +0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.1 -0.9 -2.8 +0.4
carbon source Glycerol 20 mM (C) +0.0 -0.1 -0.2 -3.0 -0.1
carbon source Glycerol 20 mM (C) -0.0 -0.3 -0.1 -2.8 +0.1
carbon source L-Ornithine 10 mM (C) +0.2 -3.2 -0.2 -0.3 +0.3
carbon source Cytidine 10 mM (C) -0.0 -2.3 -0.1 -0.6 -0.1
carbon source Glycerol 20 mM (C) +0.0 -0.4 +0.0 -2.7 +0.1
carbon source propionate 20 mM (C) +0.1 -1.4 -0.3 -1.2 -0.1
carbon source propionate 20 mM (C) -0.2 -0.7 -0.4 -1.7 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 +0.4 -0.2 -2.5 -0.1
carbon source D-Xylose 10 mM (C) +0.1 -1.7 +0.1 -1.0 -0.1
carbon source Glycerol (C) -0.1 +0.1 +0.2 -2.7 -0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +0.2 -0.2 -2.6 +0.0
carbon source L-Ornithine 10 mM (C) +0.2 -2.8 -0.0 -0.2 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 -0.3 +0.2 -2.5 +0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 +0.3 +0.4 -2.9 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.5 -0.1 -2.7 -0.1
carbon source NAG (C) +0.1 -2.7 -0.1 +0.7 -0.0
carbon source Guanosine 10 mM (C) +0.3 -1.6 +0.5 -1.2 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 +0.3 +0.1 -2.3 +0.4
carbon and nitrogen source NAG carbon and (N) -0.0 -2.3 -0.6 +1.3 -0.0
carbon and nitrogen source NAG carbon and (N); with MOPS -0.1 -1.5 -0.5 +0.8 -0.3
carbon source NAG (C) -0.1 -1.7 -0.7 +1.0 +0.0
carbon and nitrogen source NAG carbon and (N) -0.0 -2.6 -0.3 +1.3 +0.2
carbon source NAG (C); with MOPS -0.1 -1.8 -0.2 +0.9 +0.1
carbon and nitrogen source NAG carbon and (N); with MOPS -0.1 -1.4 -0.3 +1.0 +0.2
carbon and nitrogen source NAG carbon and (N) -0.2 -1.7 +0.3 +1.3 +0.1
carbon source NAG (C) +0.0 -1.1 -0.5 +1.5 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.2 +2.4 -0.2 -0.9 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 +3.5 -0.1 -0.6 +0.3
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