Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS24205 and PFLU_RS24210 are separated by 91 nucleotidesPFLU_RS24210 and PFLU_RS24215 are separated by 167 nucleotidesPFLU_RS24215 and PFLU_RS24220 overlap by 4 nucleotidesPFLU_RS24220 and PFLU_RS24225 overlap by 14 nucleotides PFLU_RS24205: PFLU_RS24205 - DNA binding protein, at 5,419,518 to 5,419,892 _RS24205 PFLU_RS24210: PFLU_RS24210 - exodeoxyribonuclease I, at 5,419,984 to 5,421,411 _RS24210 PFLU_RS24215: PFLU_RS24215 - RDD family protein, at 5,421,579 to 5,422,271 _RS24215 PFLU_RS24220: PFLU_RS24220 - stage II sporulation protein M, at 5,422,268 to 5,423,248 _RS24220 PFLU_RS24225: PFLU_RS24225 - DUF4129 domain-containing protein, at 5,423,235 to 5,424,764 _RS24225
Group Condition PFLU_RS24205 PFLU_RS24210 PFLU_RS24215 PFLU_RS24220 PFLU_RS24225
carbon source D-Xylose (C) -5.1 +0.3 +0.3 +0.1 +0.0
stress Sucrose (C) and L-Glutamine (N); with TAPS -4.3 -0.1 -0.1 +0.1 +0.1
stress Sucrose (C) and Ammonium chloride (N); with TAPS -4.2 +0.3 -0.1 -0.1 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -4.2 +0.2 +0.2 -0.2 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -4.3 +0.3 +0.0 +0.0 +0.1
stress malate (C) and Ammonium chloride (N); with TAPS -4.3 +0.5 +0.1 -0.1 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -3.5 +0.4 -0.3 -0.2 -0.1
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG -3.8 +0.0 +0.2 -0.0 +0.0
stress malate (C) and Ammonium chloride (N); with TAPS -3.8 +0.4 +0.1 -0.1 -0.1
stress malate (C) and Ammonium chloride (N); with TAPS -3.5 +0.1 +0.1 -0.3 +0.0
stress malate (C) and Ammonium chloride (N); with TAPS -3.9 +0.2 +0.2 +0.1 -0.0
stress Glucose (C) and Betaine (N); with TAPS; with chloride -3.0 -0.4 -0.1 +0.1 -0.0
carbon source L-pyroglutamic (C) -3.1 -0.2 +0.1 +0.0 -0.1
no stress control Glucose (C) and Glycine betaine (N); with MOPS -3.0 -0.4 +0.0 +0.2 -0.0
stress malate (C) and Ammonium chloride (N); with TAPS -3.9 +0.5 +0.1 -0.1 +0.1
stress malate (C) and Ammonium chloride (N); with TAPS -4.0 +0.5 +0.3 -0.1 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -3.2 +0.2 +0.3 -0.4 -0.1
stress malate (C) and Ammonium chloride (N); with MOPS -3.8 +0.3 +0.3 +0.0 +0.1
no stress control malate (C) and Ammonium chloride (N); with TAPS -3.3 -0.1 +0.1 +0.1 +0.0
stress malate (C) and Ammonium chloride (N); with MOPS -3.8 +0.5 +0.2 +0.0 +0.0
stress malate (C) and Ammonium chloride (N); with MOPS -3.3 +0.2 -0.1 +0.0 +0.0
carbon source L-Hydroxyproline (C) -3.2 +0.3 -0.2 +0.1 -0.0
stress malate (C) and Ammonium chloride (N); with TAPS -3.2 +0.2 +0.2 +0.0 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -2.1 -0.4 +0.3 +0.3 -0.7
carbon source NAG (C) -3.0 -0.1 +0.3 +0.2 +0.0
stress malate (C) and Ammonium chloride (N); with MOPS -3.3 +0.4 +0.2 +0.0 +0.1
stress Sucrose (C) and Ammonium chloride (N); with TAPS -3.1 +0.2 +0.2 +0.1 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -3.2 +0.9 +0.2 +0.0 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.9 -0.2 +0.8 +0.2 -0.4
carbon source Ferulic Acid (C) 1.5 mM +3.0 +0.2 -0.1 +0.2 -0.3
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