Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS23660 and PFLU_RS23665 are separated by 3 nucleotidesPFLU_RS23665 and PFLU_RS23670 are separated by 179 nucleotidesPFLU_RS23670 and PFLU_RS23675 are separated by 199 nucleotidesPFLU_RS23675 and PFLU_RS23680 are separated by 54 nucleotides PFLU_RS23660: PFLU_RS23660 - peptide deformylase, at 5,304,455 to 5,304,994 _RS23660 PFLU_RS23665: PFLU_RS23665 - YihY/virulence factor BrkB family protein, at 5,304,998 to 5,305,948 _RS23665 PFLU_RS23670: PFLU_RS23670 - CsbD family protein, at 5,306,128 to 5,306,313 _RS23670 PFLU_RS23675: PFLU_RS23675 - hypothetical protein, at 5,306,513 to 5,306,890 _RS23675 PFLU_RS23680: PFLU_RS23680 - long-chain fatty acid--CoA ligase, at 5,306,945 to 5,308,636 _RS23680
Group Condition PFLU_RS23660 PFLU_RS23665 PFLU_RS23670 PFLU_RS23675 PFLU_RS23680
carbon source acetate (C) -0.7 -0.3 -0.7 -0.2 -5.1
carbon source NAG (C) -0.5 -0.7 -0.7 -1.4 -3.7
carbon source NAG (C) +0.6 -0.7 +0.4 -2.2 -4.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 -0.5 -0.2 -1.7 -3.7
carbon and nitrogen source NAG carbon and (N); with MOPS -0.2 -0.1 -1.0 -0.7 -4.2
carbon source NAG (C); with MOPS -0.6 -0.2 -0.1 -0.6 -4.7
carbon source NAG (C); with MOPS +0.1 -0.1 -0.2 -0.8 -4.8
carbon and nitrogen source NAG carbon and (N) -0.2 -0.8 -1.0 +0.5 -4.2
carbon source Inosine (C) -0.4 -0.6 -0.2 -2.3 -2.1
carbon source 4-Guanidinobutyric (C) +0.4 -0.7 -0.7 -2.0 -2.5
carbon source acetate (C) -0.0 -0.1 -0.7 -0.6 -4.1
carbon source acetate (C) +0.1 -0.5 -0.2 -0.3 -4.5
carbon and nitrogen source NAG carbon and (N); with MOPS +0.0 -0.2 -0.2 +0.0 -4.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.8 -0.6 -3.0 -0.6
pH Growth at pH8 and (C) Trisodium citrate -0.6 -0.8 -1.0 -0.4 -2.3
carbon source NAG (C) -0.7 -0.4 -0.2 -0.2 -3.5
carbon source p-Coumaric (C) -0.2 -0.4 +0.2 -0.6 -4.1
carbon source octanoate 10 mM (C) +0.0 -0.3 -0.8 -0.1 -3.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.6 -0.4 -0.5 -1.9 -1.5
carbon source NAG (C); with MOPS +0.3 -0.4 +0.1 -0.1 -4.8
pH Growth at pH9 and (C) Trisodium citrate -1.0 -0.7 -0.1 -0.2 -2.9
carbon and nitrogen source NAG carbon and (N) +0.3 -0.3 -0.3 -0.6 -3.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.3 -0.5 +0.1 -1.4 -1.6
carbon and nitrogen source NAG carbon and (N); with MOPS -0.1 -0.3 +0.2 +0.1 -4.5
carbon and nitrogen source NAG carbon and (N) +0.1 -0.7 -0.2 +0.4 -4.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 -0.4 +0.5 -0.4 -3.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 -0.5 +0.5 -0.4 -3.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.1 -0.2 -0.0 +1.3 -3.9
carbon source propionate 20 mM (C) +0.4 -0.1 -0.7 +1.4 -2.4
pH Growth at pH9 and (C) Trisodium citrate -0.0 -0.3 +0.0 +2.4 -3.5
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