Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS23140 and PFLU_RS23145 are separated by 80 nucleotidesPFLU_RS23145 and PFLU_RS23150 overlap by 4 nucleotidesPFLU_RS23150 and PFLU_RS23155 are separated by 780 nucleotidesPFLU_RS23155 and PFLU_RS23160 are separated by 101 nucleotides PFLU_RS23140: PFLU_RS23140 - 4'-phosphopantetheinyl transferase superfamily protein, at 5,198,976 to 5,199,692 _RS23140 PFLU_RS23145: PFLU_RS23145 - HAMP domain-containing protein, at 5,199,773 to 5,201,383 _RS23145 PFLU_RS23150: PFLU_RS23150 - response regulator, at 5,201,380 to 5,202,105 _RS23150 PFLU_RS23155: PFLU_RS23155 - ribonucleoside-diphosphate reductase subunit alpha, at 5,202,886 to 5,205,780 _RS23155 PFLU_RS23160: PFLU_RS23160 - hypothetical protein, at 5,205,882 to 5,206,973 _RS23160
Group Condition PFLU_RS23140 PFLU_RS23145 PFLU_RS23150 PFLU_RS23155 PFLU_RS23160
carbon source L-Valine (C) N.D. -0.1 -0.5 N.D. -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. +0.0 -0.9 N.D. +0.1
carbon source L-Carnitine (C) N.D. +0.2 -0.7 N.D. -0.3
carbon source L-Lysine (C) N.D. -0.0 -0.6 N.D. -0.1
carbon source L-tyrosine 10 mM (C) N.D. -0.2 -0.4 N.D. -0.1
carbon source m-Inositol (C) N.D. +0.0 -0.7 N.D. +0.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs N.D. -0.5 -0.3 N.D. +0.2
pH Growth at pH9 and (C) Trisodium citrate N.D. +0.0 -0.6 N.D. +0.0
carbon source Inosine (C) N.D. -0.2 -0.4 N.D. +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.2 -0.7 N.D. +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. -0.2 -0.4 N.D. +0.2
carbon source L-Arabinose (C); with MOPS N.D. -0.1 -0.4 N.D. +0.2
carbon source Inosine 10 mM (C) N.D. +0.2 -0.5 N.D. +0.1
carbon source p-Coumaric (C) 5 mM N.D. +0.2 -0.4 N.D. +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. +0.1 +0.3 N.D. -0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. +0.3 -0.4 N.D. +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs N.D. -0.2 +0.4 N.D. -0.1
no stress control Growth with no stress N.D. -0.2 +0.4 N.D. +0.2
carbon and nitrogen source NAG carbon and (N) N.D. -0.1 +0.6 N.D. -0.1
carbon source Phloretic Acid 2 mM (C) N.D. +0.1 +0.6 N.D. -0.3
carbon source L-Valine (C) N.D. +0.1 +0.6 N.D. -0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. +0.2 +0.5 N.D. -0.1
carbon source 4-Aminobutyric (C) N.D. +0.2 +0.6 N.D. -0.3
carbon source p-Coumaric 2 mM (C) N.D. +0.1 +0.6 N.D. -0.1
stress Betaine (C)(N); with TAPS; with chloride N.D. -0.0 +0.6 N.D. +0.0
no stress control Glycine betaine (C)(N); with MOPS N.D. -0.0 +0.4 N.D. +0.2
stress malate (C) and Ammonium chloride (N); with TAPS N.D. +0.1 +0.5 N.D. +0.1
carbon source propionate 20 mM (C) N.D. +0.2 +0.4 N.D. +0.2
carbon source Xanthosine (C) N.D. +0.1 +0.8 N.D. +0.0
carbon source Phloretic Acid 2 mM (C) N.D. +0.1 +0.5 N.D. +0.4
remove
PFLU_RS23140
plot		 remove
PFLU_RS23145
plot		 remove
PFLU_RS23150		 remove
PFLU_RS23155
plot		 remove
PFLU_RS23160
plot