Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS23010 and PFLU_RS23015 are separated by 115 nucleotidesPFLU_RS23015 and PFLU_RS23020 are separated by 635 nucleotidesPFLU_RS23020 and PFLU_RS23025 are separated by 63 nucleotidesPFLU_RS23025 and PFLU_RS23030 overlap by 8 nucleotides PFLU_RS23010: PFLU_RS23010 - radical SAM protein, at 5,172,389 to 5,173,357 _RS23010 PFLU_RS23015: PFLU_RS23015 - TetR/AcrR family transcriptional regulator, at 5,173,473 to 5,174,126 _RS23015 PFLU_RS23020: PFLU_RS23020 - TatD family hydrolase, at 5,174,762 to 5,175,547 _RS23020 PFLU_RS23025: PFLU_RS23025 - DNA polymerase III subunit delta', at 5,175,611 to 5,176,600 _RS23025 PFLU_RS23030: PFLU_RS23030 - dTMP kinase, at 5,176,593 to 5,177,225 _RS23030
Group Condition PFLU_RS23010 PFLU_RS23015 PFLU_RS23020 PFLU_RS23025 PFLU_RS23030
stress Betaine (C)(N); with TAPS; with chloride -2.1 -2.4 +0.0 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.7 -0.3 -0.2 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.8 -1.1 -0.2 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -2.1 -2.2 +0.4 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.9 -1.1 +0.2 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.6 -0.2 -0.0 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.7 -0.2 +0.1 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.1 -1.7 +0.2 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.1 -1.5 -0.1 N.D. N.D.
carbon source propionate 20 mM (C) -0.4 -2.9 -0.3 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -2.6 -1.2 +0.3 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.5 -0.0 +0.1 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.5 -1.3 +0.3 N.D. N.D.
carbon source Xanthosine (C) -2.9 -0.4 -0.1 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.4 +0.1 -0.0 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.4 -0.8 -0.1 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.5 +0.2 +0.2 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -2.1 -1.1 +0.2 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -2.0 -1.4 +0.3 N.D. N.D.
carbon source Inosine 10 mM (C) -3.1 -0.1 +0.1 N.D. N.D.
carbon source Inosine (C) -3.1 -0.2 +0.3 N.D. N.D.
carbon source propionate 20 mM (C) -0.5 -2.5 +0.1 N.D. N.D.
carbon source Inosine 10 mM (C) -2.8 -0.3 +0.1 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -1.4 -1.7 +0.2 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.3 +0.2 +0.2 N.D. N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -3.0 +0.2 +0.0 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.3 -0.7 +0.2 N.D. N.D.
carbon source Inosine (C) -2.5 -0.5 +0.5 N.D. N.D.
carbon source Xanthosine (C) -3.0 +0.8 +0.3 N.D. N.D.
carbon source L-Valine (C) -1.1 +2.0 -0.4 N.D. N.D.
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