Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS22845 and PFLU_RS22850 are separated by 647 nucleotidesPFLU_RS22850 and PFLU_RS22855 are separated by 163 nucleotidesPFLU_RS22855 and PFLU_RS22860 overlap by 4 nucleotidesPFLU_RS22860 and PFLU_RS22865 are separated by 4 nucleotides PFLU_RS22845: PFLU_RS22845 - acetyl-CoA C-acetyltransferase, at 5,141,054 to 5,142,259 _RS22845 PFLU_RS22850: PFLU_RS22850 - cytochrome c, at 5,142,907 to 5,143,713 _RS22850 PFLU_RS22855: PFLU_RS22855 - transglutaminase family protein, at 5,143,877 to 5,144,680 _RS22855 PFLU_RS22860: PFLU_RS22860 - alpha-E domain-containing protein, at 5,144,677 to 5,145,627 _RS22860 PFLU_RS22865: PFLU_RS22865 - circularly permuted type 2 ATP-grasp protein, at 5,145,632 to 5,147,041 _RS22865
Group Condition PFLU_RS22845 PFLU_RS22850 PFLU_RS22855 PFLU_RS22860 PFLU_RS22865
pH Growth at pH7 and (C) D-Glucose -0.1 -0.2 -1.0 -0.2 -0.2
stress Betaine (C)(N); with TAPS; with chloride -0.3 -0.3 -0.5 -0.1 -0.2
pH Growth at pH7 and (C) D-Glucose -0.3 -0.1 -0.9 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -0.3 -0.3 +0.0 -0.1
stress Glucose (C) and Betaine (N); with TAPS; with chloride -0.5 -0.3 -0.2 -0.2 -0.1
no stress control Growth with no stress; with MOPS -0.1 -0.3 -0.6 -0.2 -0.2
temperature Growth at 25C -0.4 -0.1 -0.5 -0.3 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.5 -0.3 -0.3 +0.1
carbon source L-Valine (C) -0.5 +0.1 -0.2 -0.2 -0.1
carbon source NAG (C) +0.2 -0.2 -0.6 +0.1 -0.4
stress Betaine (C)(N); with TAPS; with chloride +0.2 -0.3 -0.4 -0.2 -0.2
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.2 -0.4 -0.3 +0.0 -0.2
carbon source L-Valine (C) +0.5 +0.0 -0.8 -0.2 -0.2
carbon source L-Arabinose (C) -0.3 +0.2 -0.5 -0.2 +0.1
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.4 +0.4 -0.3 -0.1
pH Growth at pH8 and (C) D-Glucose +0.3 -0.2 -0.5 -0.1 -0.1
carbon source Xanthosine (C) +0.2 -0.6 +0.2 -0.1 -0.1
carbon source L-Carnitine (C) -0.8 -0.0 -0.1 +0.2 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 -0.4 -0.3 +0.1 -0.1
carbon source L-Carnitine (C) +0.5 +0.1 -0.7 +0.1 -0.3
stress Betaine (C)(N); with MOPS; with chloride +0.6 -0.1 -0.4 -0.4 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 +0.2 +0.7 -0.2 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.6 -0.1 -0.4 -0.1 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.6 +0.4 +0.3 +0.0 -0.1
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.4 +0.5 -0.3 -0.4
carbon source caffeic 2 mM (C) -0.2 +0.3 -0.4 +0.1 +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 -0.4 +0.3 +0.3 +0.2
stress Betaine (C)(N); with TAPS; with chloride +0.7 -0.1 -0.4 +0.1 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.3 +0.7 -0.2 +0.2
stress L-Glutamine (C)(N); with TAPS; with chloride +0.5 -0.3 +0.4 +0.3 +0.0
remove
PFLU_RS22845
plot		 remove
PFLU_RS22850
plot		 remove
PFLU_RS22855		 remove
PFLU_RS22860
plot		 remove
PFLU_RS22865
plot