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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22645 and PFLU_RS22650 are separated by 41 nucleotides
PFLU_RS22650 and PFLU_RS22655 are separated by 15 nucleotides
PFLU_RS22655 and PFLU_RS22660 are separated by 37 nucleotides
PFLU_RS22660 and PFLU_RS22665 are separated by 2 nucleotides
PFLU_RS22645: PFLU_RS22645 - EamA family transporter, at 5,098,279 to 5,099,223
_RS22645
PFLU_RS22650: PFLU_RS22650 - molybdopterin-synthase adenylyltransferase MoeB, at 5,099,265 to 5,101,127
_RS22650
PFLU_RS22655: PFLU_RS22655 - cysteine synthase family protein, at 5,101,143 to 5,102,057
_RS22655
PFLU_RS22660: PFLU_RS22660 - serine acetyltransferase, at 5,102,095 to 5,103,087
_RS22660
PFLU_RS22665: PFLU_RS22665 - alanyl-tRNA editing protein, at 5,103,090 to 5,103,818
_RS22665
Group
Condition
PFLU
_RS22645
PFLU
_RS22650
PFLU
_RS22655
PFLU
_RS22660
PFLU
_RS22665
carbon source
Ferulic Acid 2 mM (C)
-0.5
-0.5
-0.4
-0.8
-1.8
no stress control
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-3.8
+0.0
-0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
-3.5
+0.2
-0.1
+0.2
-0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-2.4
-0.0
+0.1
+0.0
-1.0
carbon source
NAG (C); with MOPS
-3.0
-0.1
-0.2
-0.2
+0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-3.0
-0.0
-0.0
-0.0
-0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-3.8
+0.1
+0.1
+0.2
+0.1
stress
Betaine (C)(N); with TAPS; with chloride
+0.1
-0.8
-0.2
-0.8
-1.3
carbon and nitrogen source
NAG carbon and (N); with MOPS
-3.0
-0.1
-0.1
-0.1
+0.5
carbon and nitrogen source
NAG carbon and (N); with MOPS
-3.1
+0.0
-0.1
-0.0
+0.4
carbon source
L-Valine (C)
-0.1
-0.3
-0.1
+0.2
-2.4
carbon and nitrogen source
NAG carbon and (N); with MOPS
-2.9
+0.2
+0.1
-0.1
+0.0
temperature
Growth at 10C; with MOPS
-2.6
+0.0
-0.3
-0.1
+0.3
carbon source
NAG (C); with MOPS
-3.1
+0.1
-0.0
+0.1
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS
-2.9
-0.1
+0.2
+0.1
+0.5
carbon source
NAG (C)
-1.7
+0.5
+0.0
+0.2
-1.2
carbon source
acetate (C)
-2.4
+0.2
+0.2
+0.2
+0.6
carbon source
p-Coumaric (C) 5 mM
+1.3
+0.0
-0.2
+0.1
-2.1
carbon source
D-Xylose 10 mM (C)
+1.3
-0.3
-0.3
-0.4
-1.2
carbon source
Glycerol (C)
+0.2
+0.9
+0.9
+1.1
-1.0
carbon source
D-Fructose (C)
+2.1
+0.3
+0.2
+0.3
+0.3
carbon source
D-Galactose (C)
+1.6
+1.1
+0.9
+1.2
-0.1
carbon source
D-Galactose (C)
+1.4
+1.1
+1.0
+1.3
+0.0
carbon source
L-Ornithine 10 mM (C)
-4.0
+2.4
+2.2
+2.5
+2.3
carbon source
D-Galactose (C)
+1.3
+1.0
+1.1
+1.4
+0.8
carbon source
L-Ornithine 10 mM (C)
-3.2
+2.2
+2.0
+2.4
+2.3
carbon source
L-Ornithine 10 mM (C)
-2.9
+2.8
+2.7
+2.9
+2.4
carbon source
L-Ornithine (C)
-2.6
+2.8
+2.7
+2.8
+2.7
carbon source
L-Ornithine (C)
-2.1
+2.8
+2.6
+2.7
+2.5
carbon source
L-Ornithine (C)
-0.5
+3.1
+2.9
+3.0
+2.1
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