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Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22565 and PFLU_RS22570 are separated by 274 nucleotides
PFLU_RS22570 and PFLU_RS22575 are separated by 13 nucleotides
PFLU_RS22575 and PFLU_RS22580 are separated by 209 nucleotides
PFLU_RS22580 and PFLU_RS22585 overlap by 1 nucleotides
PFLU_RS22565: PFLU_RS22565 - EscC/YscC/HrcC family type III secretion system outer membrane ring protein, at 5,080,111 to 5,081,556
_RS22565
PFLU_RS22570: PFLU_RS22570 - ABC transporter substrate-binding protein, at 5,081,831 to 5,083,057
_RS22570
PFLU_RS22575: PFLU_RS22575 - ANTAR domain-containing protein, at 5,083,071 to 5,083,646
_RS22575
PFLU_RS22580: PFLU_RS22580 - NarK/NasA family nitrate transporter, at 5,083,856 to 5,085,067
_RS22580
PFLU_RS22585: PFLU_RS22585 - bifunctional protein-serine/threonine kinase/phosphatase, at 5,085,067 to 5,086,737
_RS22585
Group
Condition
PFLU
_RS22565
PFLU
_RS22570
PFLU
_RS22575
PFLU
_RS22580
PFLU
_RS22585
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-2.1
-3.6
-4.1
-1.4
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.2
-2.0
-3.7
-4.0
-1.3
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-1.8
-3.6
-3.5
-1.2
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.0
-1.6
-3.0
-4.0
-1.2
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-1.6
-3.6
-2.1
-1.2
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-0.4
-4.0
-3.3
-0.6
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.0
-1.5
-3.5
-1.9
-1.1
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-1.8
-2.8
-2.3
-1.1
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.0
-0.6
-3.8
-2.7
-0.6
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-1.6
-2.7
-2.3
-1.1
no stress control
Glucose (C) and nitrate (N); with MOPS
-0.1
-0.4
-3.5
-2.8
-0.6
no stress control
Glucose (C) and nitrate (N); with MOPS
+0.1
-0.8
-2.8
-3.3
-0.5
nitrogen source
NAG (N); with MOPS
+0.0
-0.7
-3.5
-1.6
-0.6
no stress control
Glucose (C) and nitrate (N); with TAPS
+0.1
-1.3
-2.4
-1.8
-0.5
nitrogen source
NAG (N); with MOPS
+0.3
-1.5
-1.5
-2.4
-0.5
no stress control
Glucose (C) and nitrate (N); with TAPS
+0.1
-0.7
-2.4
-1.9
-0.5
nitrogen source
nitrate (N)
+0.1
-0.8
-2.7
-1.4
-0.3
no stress control
Glucose (C) and nitrate (N); with TAPS
-0.0
-0.6
-2.8
-1.3
-0.3
no stress control
Glucose (C) and nitrate (N); with TAPS
+0.1
-0.4
-2.4
-1.9
-0.2
no stress control
Glucose (C) and nitrate (N); with TAPS
-0.0
-0.7
-2.4
-1.4
-0.4
nitrogen source
nitrate (N); with MOPS
+0.2
-0.8
-2.5
-1.3
-0.4
nitrogen source
nitrate (N)
+0.1
-0.9
-1.8
-2.0
-0.3
no stress control
Glucose (C) and nitrate (N); with TAPS
-0.0
-0.4
-2.3
-1.8
-0.2
nitrogen source
NAG (N)
+0.2
-1.1
-2.2
-1.6
-0.2
nitrogen source
no extra (N)
+0.1
-0.7
-2.3
-1.5
-0.3
nitrogen source
no extra (N); with MOPS
+0.0
-0.9
-1.6
-1.8
-0.4
no stress control
Glucose (C) and nitrate (N); with TAPS
+0.1
-0.3
-2.4
-1.9
-0.1
nitrogen source
NAG (N); with MOPS
+0.2
-0.8
-2.2
-1.3
-0.4
nitrogen source
nitrate (N)
+0.2
-0.6
-2.1
-1.6
-0.4
nitrogen source
nitrate (N); with MOPS
+0.2
-0.8
-2.0
-1.2
-0.5
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