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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22370 and PFLU_RS22375 are separated by 22 nucleotides
PFLU_RS22375 and PFLU_RS22380 overlap by 8 nucleotides
PFLU_RS22380 and PFLU_RS22385 are separated by 101 nucleotides
PFLU_RS22385 and PFLU_RS22390 are separated by 0 nucleotides
PFLU_RS22370: PFLU_RS22370 - cadmium-translocating P-type ATPase, at 5,030,241 to 5,032,685
_RS22370
PFLU_RS22375: PFLU_RS22375 - cbb3-type cytochrome oxidase assembly protein CcoS, at 5,032,708 to 5,032,926
_RS22375
PFLU_RS22380: PFLU_RS22380 - sulfite exporter TauE/SafE family protein, at 5,032,919 to 5,033,602
_RS22380
PFLU_RS22385: PFLU_RS22385 - oxygen-independent coproporphyrinogen III oxidase, at 5,033,704 to 5,035,086
_RS22385
PFLU_RS22390: PFLU_RS22390 - hypothetical protein, at 5,035,087 to 5,035,554
_RS22390
Group
Condition
PFLU
_RS22370
PFLU
_RS22375
PFLU
_RS22380
PFLU
_RS22385
PFLU
_RS22390
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-4.4
-5.1
-3.4
+0.3
-1.1
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-4.3
-4.5
-4.4
+0.0
+0.5
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-4.3
-4.1
-4.3
+0.5
-0.1
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-3.9
-4.1
-4.2
+0.3
+0.2
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-4.1
-4.5
-4.2
+1.1
+0.3
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-4.1
-4.6
-4.3
+1.1
+0.6
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-3.6
-4.1
-3.8
+0.8
-0.3
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-3.7
-4.2
-3.9
+1.1
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS
-2.1
-2.6
-2.4
-0.5
+0.2
stress
malate (C) and Ammonium chloride (N); with TAPS
-2.1
-2.0
-2.5
-0.6
+0.0
stress
malate (C) and Ammonium chloride (N); with TAPS
-2.0
-2.3
-1.8
-0.4
+0.2
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-2.3
-2.2
-2.6
+0.6
+0.1
stress
malate (C) and Ammonium chloride (N); with MOPS
-2.2
-2.1
-3.0
+0.8
+0.2
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-2.3
-2.2
-2.4
+0.5
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-1.4
-1.7
-1.9
-0.7
-0.4
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-2.3
-2.6
-2.4
+0.7
+0.6
carbon source
L-tyrosine 10 mM (C)
-2.0
-2.0
-1.6
+0.0
-0.3
carbon source
4-Hydroxyphenylpropionic (C) 1.5 mM
-1.5
-1.4
-2.2
-0.5
-0.2
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-1.7
-1.5
-2.1
-0.7
+0.2
stress
malate (C) and Ammonium chloride (N); with MOPS
-2.0
-2.5
-2.1
+0.6
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS
-1.8
-2.0
-1.7
-0.2
-0.0
carbon source
L-tyrosine 10 mM (C)
-1.9
-2.0
-1.5
+0.2
-0.3
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-1.6
-1.4
-1.7
-0.8
-0.1
stress
malate (C) and Ammonium chloride (N); with TAPS
-1.4
-1.7
-1.8
-0.2
-0.4
carbon source
4-Hydroxybenzoic Acid (C) 1.5 mM
-2.5
-1.9
-1.8
+0.7
+0.6
stress
malate (C) and Ammonium chloride (N); with MOPS
-1.8
-2.0
-1.8
+0.8
+0.2
carbon source
p-Coumaric (C) 5 mM
-0.9
-1.8
-1.7
+1.4
+0.3
carbon source
acetate (C)
-1.3
-1.0
-1.2
+1.9
-0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
+1.8
+1.8
+1.8
-0.2
-0.6
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
+1.7
+1.7
+1.8
-0.1
-0.4
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