Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS22225 and PFLU_RS22230 are separated by 3 nucleotidesPFLU_RS22230 and PFLU_RS22235 are separated by 82 nucleotidesPFLU_RS22235 and PFLU_RS22240 are separated by 335 nucleotidesPFLU_RS22240 and PFLU_RS22245 are separated by 284 nucleotides PFLU_RS22225: PFLU_RS22225 - alpha/beta fold hydrolase, at 4,996,638 to 4,997,441 _RS22225 PFLU_RS22230: PFLU_RS22230 - peptidylprolyl isomerase A, at 4,997,445 to 4,998,008 _RS22230 PFLU_RS22235: PFLU_RS22235 - ABC transporter ATP-binding protein, at 4,998,091 to 4,999,923 _RS22235 PFLU_RS22240: PFLU_RS22240 - N-acetyltransferase, at 5,000,259 to 5,001,383 _RS22240 PFLU_RS22245: PFLU_RS22245 - hypothetical protein, at 5,001,668 to 5,003,011 _RS22245
Group Condition PFLU_RS22225 PFLU_RS22230 PFLU_RS22235 PFLU_RS22240 PFLU_RS22245
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -0.1 -0.3 -0.7 +0.0
pH Growth at pH7 and (C) D-Glucose -0.6 -0.2 +0.3 -0.5 -0.0
carbon source L-Valine (C) -0.4 +0.2 -0.1 -0.7 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 -0.1 -0.5 -0.2 +0.2
no stress control L-Glutamine (C)(N); with MOPS -0.2 +0.2 -0.4 -0.3 -0.1
carbon and nitrogen source NAG carbon and (N) -0.1 -0.0 -0.3 -0.6 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.5 +0.3 -0.2 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 -0.1 +0.1 +0.2 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.2 -0.3 +0.2 -0.5 -0.2
no stress control Glycine betaine (C)(N); with TAPS -0.5 +0.4 -0.3 -0.1 +0.2
carbon source Ferulic Acid 2 mM (C) +0.2 +0.3 -0.8 -0.0 +0.1
stress Betaine (C)(N); with MOPS; with chloride -0.3 +0.1 -0.4 +0.2 +0.2
pH Growth at pH8 and (C) Trisodium citrate +0.2 +0.3 -0.2 -0.5 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.4 +0.3 -0.3 +0.0
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.3 +0.3 -0.4 -0.1 +0.0
carbon source acetate (C) +0.3 +0.3 -0.4 +0.1 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 +0.3 -0.4 +0.2 -0.1
temperature shift Temperature shift 30_to_25; with MOPS +0.5 -0.4 +0.2 -0.1 +0.0
nitrogen source NAG (N); with MOPS +0.1 +0.5 +0.2 -0.6 +0.1
carbon source Phloretic Acid 2 mM (C) -0.2 +0.3 -0.0 +0.6 -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.3 +0.4 +0.5 -0.4 +0.1
carbon source Phloretic Acid 2 mM (C) +0.4 +0.3 -0.2 -0.4 +0.4
carbon and nitrogen source NAG carbon and (N) -0.0 +0.6 -0.3 +0.2 +0.1
pH Growth at pH6 and (C) D-Glucose +0.4 +0.4 +0.1 -0.4 +0.2
carbon source D,L-Malic Acid (C) +0.5 +0.2 -0.3 +0.2 +0.3
stress Betaine (C)(N); with MOPS; with chloride +0.4 +0.4 -0.4 +0.3 +0.1
carbon source Inosine (C) +0.3 +0.5 +0.2 -0.2 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.0 +0.5 +0.2 +0.4 -0.1
carbon source Xanthosine (C) +0.5 +0.4 -0.0 -0.0 +0.3
carbon source 4-Guanidinobutyric (C) +0.3 +0.4 +0.5 +0.1 +0.3
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