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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS31030 and PFLU_RS21955 are separated by 28 nucleotides
PFLU_RS21955 and PFLU_RS21960 are separated by 278 nucleotides
PFLU_RS21960 and PFLU_RS21965 are separated by 146 nucleotides
PFLU_RS21965 and PFLU_RS21970 are separated by 65 nucleotides
PFLU_RS31030: PFLU_RS31030 - hypothetical protein, at 4,943,715 to 4,944,106
_RS31030
PFLU_RS21955: PFLU_RS21955 - hypothetical protein, at 4,944,135 to 4,944,356
_RS21955
PFLU_RS21960: PFLU_RS21960 - hypothetical protein, at 4,944,635 to 4,945,117
_RS21960
PFLU_RS21965: PFLU_RS21965 - transporter, at 4,945,264 to 4,946,559
_RS21965
PFLU_RS21970: PFLU_RS21970 - redoxin domain-containing protein, at 4,946,625 to 4,947,176
_RS21970
Group
Condition
PFLU
_RS31030
PFLU
_RS21955
PFLU
_RS21960
PFLU
_RS21965
PFLU
_RS21970
carbon source
p-Coumaric (C) 5 mM
-0.5
-0.8
+0.0
-4.1
+0.0
carbon source
NAG (C)
-0.1
-1.0
+0.5
-4.6
-0.1
carbon source
acetate (C)
-0.2
-0.8
+0.6
-4.3
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.4
-0.4
+0.9
-4.7
-0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.4
-0.7
+1.0
-4.4
-0.0
carbon and nitrogen source
NAG carbon and (N)
+0.1
-0.6
+0.8
-4.7
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.3
-0.5
+0.9
-4.6
+0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.5
-0.3
+0.8
-4.4
-0.1
no stress control
Betaine (C)(N); with MOPS
-0.1
-0.8
+0.3
-3.6
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.7
-0.4
+0.9
-3.8
-0.3
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.4
-0.2
+0.7
-4.2
-0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.1
-0.7
+1.1
-4.5
-0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.3
-0.7
+0.9
-4.1
+0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.3
-0.3
+0.8
-4.1
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.2
-0.4
+1.1
-4.6
-0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.7
-0.2
+1.0
-3.8
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.3
+0.1
+0.9
-4.7
+0.1
carbon source
propionate 20 mM (C)
+0.2
-0.6
+0.5
-3.8
+0.0
carbon source
Itaconic Acid 20 mM (C)
+0.2
+0.2
+0.5
-4.4
+0.0
carbon and nitrogen source
NAG carbon and (N)
-0.0
-0.5
+1.3
-3.9
-0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.5
-1.2
+1.5
-2.6
-0.3
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.4
-0.8
+1.3
-2.9
-0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-0.4
-0.8
+1.7
-2.7
-0.3
carbon source
p-Coumaric (C)
-0.0
-0.6
+1.7
-3.8
+0.2
carbon source
p-Coumaric (C)
+0.1
-0.9
+1.7
-3.6
+0.2
carbon and nitrogen source
NAG carbon and (N)
+0.1
+0.4
+1.0
-3.7
+0.4
carbon source
Vanillic Acid (C)
-0.2
-0.4
+1.5
-2.7
+0.3
carbon source
octanoate 10 mM (C)
+0.4
+0.4
+0.1
+4.0
+0.4
carbon source
octanoate 10 mM (C)
+0.3
+0.8
+0.3
+4.2
+0.5
carbon source
octanoate 10 mM (C)
+0.3
+0.3
+0.4
+4.8
+0.6
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