Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS21225 and PFLU_RS31025 are separated by 330 nucleotidesPFLU_RS31025 and PFLU_RS21235 are separated by 54 nucleotidesPFLU_RS21235 and PFLU_RS21240 are separated by 364 nucleotidesPFLU_RS21240 and PFLU_RS21245 are separated by 68 nucleotides PFLU_RS21225: PFLU_RS21225 - SDR family oxidoreductase, at 4,775,593 to 4,776,408 _RS21225 PFLU_RS31025: PFLU_RS31025 - DUF3309 domain-containing protein, at 4,776,739 to 4,776,891 _RS31025 PFLU_RS21235: PFLU_RS21235 - LTA synthase family protein, at 4,776,946 to 4,779,033 _RS21235 PFLU_RS21240: PFLU_RS21240 - hypothetical protein, at 4,779,398 to 4,779,589 _RS21240 PFLU_RS21245: PFLU_RS21245 - hypothetical protein, at 4,779,658 to 4,780,188 _RS21245
Group Condition PFLU_RS21225 PFLU_RS31025 PFLU_RS21235 PFLU_RS21240 PFLU_RS21245
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -1.8 +0.2 -5.2 -0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -0.2 +0.1 -4.2 -0.6
carbon and nitrogen source NAG carbon and (N) -0.1 -1.2 +0.3 -4.2 -0.1
temperature shift Temperature shift 10_to_25; with MOPS -0.3 -0.4 -0.2 -4.3 -0.1
carbon source D-(+)-Galactosamine 10 mM (C) -0.4 -0.2 +0.1 -4.7 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -2.3 +0.2 -3.5 +0.7
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.5 +0.3 -0.2 -4.2 -0.1
carbon source NAG (C) -0.0 +0.3 -0.1 -4.1 -0.7
carbon source L-Arabinose (C); with MOPS -0.3 -0.0 -0.0 -4.2 -0.0
nitrogen source nitrate (N); with MOPS +0.3 -0.7 -0.3 -4.0 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.0 -0.0 -4.1 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.7 +0.3 -3.7 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.4 -0.2 -3.9 +0.4
pH Growth at pH7 and (C) D-Glucose +0.1 -0.0 -0.2 -3.9 -0.3
carbon source Betaine 10 mM (C) -0.0 +0.1 -0.0 -4.7 +0.3
no stress control Glycine betaine (C)(N); with TAPS +0.1 -0.0 +0.3 -4.9 +0.3
nitrogen source Ammonium chloride (N); with MOPS +0.3 -0.3 -0.1 -4.2 +0.1
no stress control Glucose (C) and Glycine betaine (N); with MOPS +0.1 +0.5 +0.2 -4.9 +0.1
nitrogen source nitrate (N) -0.1 -0.3 -0.2 -3.3 -0.1
carbon source Phloretic Acid 2 mM (C) -0.3 -0.4 +0.3 -3.9 +0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.7 +0.2 -3.6 -0.0
carbon source L-Valine (C) -0.2 -0.6 +0.3 -3.0 -0.3
stress Betaine (C)(N); with MOPS; with chloride +0.4 -0.2 -0.1 -4.0 +0.0
pH Growth at pH9 and (C) Trisodium citrate -0.2 +0.1 -0.2 -3.5 +0.1
carbon and nitrogen source NAG carbon and (N) -0.2 -0.2 +0.2 -2.7 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +0.5 +0.2 -4.9 +0.2
carbon source acetate 30 mM (C) -0.5 +0.0 +0.1 -3.2 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +0.4 +0.1 -3.6 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 +0.3 -0.0 -3.4 +0.6
carbon source Ferulic Acid 2 mM (C) +0.2 +0.2 +0.0 -3.3 +0.7
remove
PFLU_RS21225
plot		 remove
PFLU_RS31025
plot		 remove
PFLU_RS21235		 remove
PFLU_RS21240
plot		 remove
PFLU_RS21245
plot