Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS21000 and PFLU_RS21005 are separated by 415 nucleotidesPFLU_RS21005 and PFLU_RS21010 are separated by 86 nucleotidesPFLU_RS21010 and PFLU_RS21015 are separated by 135 nucleotidesPFLU_RS21015 and PFLU_RS30995 are separated by 119 nucleotides PFLU_RS21000: PFLU_RS21000 - SidA/IucD/PvdA family monooxygenase, at 4,718,778 to 4,720,031 _RS21000 PFLU_RS21005: PFLU_RS21005 - methyl-accepting chemotaxis protein, at 4,720,447 to 4,722,468 _RS21005 PFLU_RS21010: PFLU_RS21010 - peptide-methionine (S)-S-oxide reductase MsrA, at 4,722,555 to 4,723,061 _RS21010 PFLU_RS21015: PFLU_RS21015 - alpha/beta fold hydrolase, at 4,723,197 to 4,724,237 _RS21015 PFLU_RS30995: PFLU_RS30995 - DUF2986 domain-containing protein, at 4,724,357 to 4,724,518 _RS30995
Group Condition PFLU_RS21000 PFLU_RS21005 PFLU_RS21010 PFLU_RS21015 PFLU_RS30995
carbon source Choline chloride 10 mM (C) +0.2 -0.1 -1.0 -1.4 -1.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -0.8 -1.1 -1.1 +0.3
carbon source Inosine (C) +0.3 -0.3 -0.8 -1.4 -0.6
nitrogen source NAG (N); with MOPS -0.1 -0.4 +0.1 -1.9 +0.1
carbon source Cytidine 10 mM (C) -0.2 -0.3 -0.6 -0.7 -0.3
carbon source 4-Aminobutyric (C) +0.1 +0.1 -0.5 -0.5 -1.1
carbon source L-Valine (C) -0.1 -0.2 -1.1 -1.0 +1.0
carbon source Phloretic Acid 2 mM (C) -0.4 -0.8 +0.6 -0.6 -0.0
carbon source acetate (C) -0.3 +0.1 +0.6 -0.7 -0.6
pH Growth at pH8 and (C) D-Glucose -0.2 -0.4 +0.7 -0.9 -0.3
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 +0.0 +0.7 -0.8 -0.7
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.3 +0.4 -0.0 -1.2
temperature shift Temperature shift 10_to_25; with MOPS +0.2 +0.0 +0.6 -0.9 -0.5
carbon source NAG (C) +0.3 +0.1 +0.5 -0.2 -1.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.3 -0.1 +0.5 -0.7 -0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 +0.2 +0.6 +0.1 -1.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +0.3 +0.6 -1.1 -0.1
carbon source L-Valine (C) -0.2 +0.2 -0.2 +0.6 -0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.6 -0.7 +0.4 +0.1 +0.6
carbon source Quinic Acid (C) -0.1 -0.2 -1.1 +0.5 +0.8
carbon source D,L-Malic Acid (C) +0.4 +0.3 -1.0 -0.1 +0.6
carbon source p-Coumaric (C) 5 mM -0.2 +0.3 +1.1 -0.1 -0.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +0.0 +0.3 +1.0 -0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +0.7 -1.3 +0.9 +0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.0 -0.2 +1.0 -0.6 +0.4
carbon source L-Carnitine (C) +0.1 -0.0 -0.7 +0.5 +0.9
carbon source L-Carnitine (C) +0.2 -0.2 +0.4 -0.6 +1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -0.4 +0.6 +0.4 +1.0
stress Betaine (C)(N); with TAPS; with chloride +0.3 +0.0 +0.9 +0.7 -0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 +0.1 +0.8 +0.4 +0.4
remove
PFLU_RS21000
plot		 remove
PFLU_RS21005
plot		 remove
PFLU_RS21010		 remove
PFLU_RS21015
plot		 remove
PFLU_RS30995
plot