Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20945 and PFLU_RS20950 are separated by 39 nucleotidesPFLU_RS20950 and PFLU_RS20955 overlap by 4 nucleotidesPFLU_RS20955 and PFLU_RS20960 are separated by 9 nucleotidesPFLU_RS20960 and PFLU_RS20965 are separated by 54 nucleotides PFLU_RS20945: PFLU_RS20945 - acyl-CoA dehydrogenase, at 4,708,282 to 4,709,523 _RS20945 PFLU_RS20950: PFLU_RS20950 - acetylornithine deacetylase, at 4,709,563 to 4,710,714 _RS20950 PFLU_RS20955: PFLU_RS20955 - DUF1028 domain-containing protein, at 4,710,711 to 4,711,385 _RS20955 PFLU_RS20960: PFLU_RS20960 - hypothetical protein, at 4,711,395 to 4,712,126 _RS20960 PFLU_RS20965: PFLU_RS20965 - ABC transporter substrate-binding protein, at 4,712,181 to 4,713,011 _RS20965
Group Condition PFLU_RS20945 PFLU_RS20950 PFLU_RS20955 PFLU_RS20960 PFLU_RS20965
carbon source Xanthosine (C) +0.1 -0.6 -5.3 -0.2 -0.5
carbon source Inosine (C) -0.4 +0.5 -5.3 -0.9 -0.2
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.3 -4.6 -0.6 -0.4
carbon source L-Valine (C) -0.2 +0.2 -3.8 -0.8 -0.6
temperature Growth at 25C -0.2 +0.3 -4.4 -0.8 -0.1
carbon source L-Lysine (C) -0.5 -0.0 -4.3 +0.1 -0.2
no stress control L-Glutamine (C)(N); with TAPS -0.1 +0.1 -5.3 +0.4 +0.1
carbon source p-Coumaric (C) 5 mM -0.1 +0.1 -4.2 +0.1 -0.4
stress L-Glutamine (C)(N); with TAPS; with chloride -0.1 -0.3 -3.2 -0.9 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.2 -4.1 +0.0 +0.1
carbon source Guanosine 10 mM (C) -0.5 +0.2 -3.3 -0.5 +0.1
carbon source L-Arabinose (C); with MOPS +0.1 -0.5 -3.8 +0.3 -0.0
carbon source acetate 30 mM (C) +0.3 +0.2 -4.6 +0.1 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 +0.1 -3.8 -0.5 -0.2
temperature shift Temperature shift 30_to_25; with MOPS -0.0 -0.1 -4.1 +0.5 +0.0
stress Betaine (C)(N); with TAPS; with chloride +0.1 -0.3 -3.0 -1.0 +0.6
carbon and nitrogen source NAG carbon and (N) +0.0 -0.5 -3.1 +0.3 -0.3
carbon source 4-Aminobutyric (C) +0.5 +0.3 -4.0 -0.1 -0.1
carbon source Inosine 10 mM (C) +0.1 -0.1 -3.7 +0.4 +0.1
nitrogen source nitrate (N); with MOPS +0.0 -0.0 -3.6 +0.5 -0.1
carbon source Cytidine 10 mM (C) -0.3 -0.2 -2.9 +0.0 +0.3
temperature Growth at 30C +0.5 -0.3 -3.0 -0.1 -0.1
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.1 -0.3 -3.5 +0.6 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 +0.1 +0.2 -2.9 +0.1
no stress control Glucose (C) and L-Glutamine (N); with TAPS +0.4 +0.3 -1.9 -1.4 +0.1
stress Betaine (C)(N); with MOPS; with chloride -0.9 -0.0 +1.1 -1.7 +0.0
stress Betaine (C)(N); with MOPS; with chloride -0.2 +0.4 -2.4 +0.6 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.4 +0.4 +1.1 -1.9 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.6 +0.7 -1.8 -0.6 +0.3
carbon source L-Carnitine (C) -0.1 +0.4 +1.4 -1.4 -0.6
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