Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20795 and PFLU_RS20800 are separated by 31 nucleotidesPFLU_RS20800 and PFLU_RS20805 are separated by 235 nucleotidesPFLU_RS20805 and PFLU_RS20810 are separated by 138 nucleotidesPFLU_RS20810 and PFLU_RS20815 are separated by 17 nucleotides PFLU_RS20795: PFLU_RS20795 - MFS transporter, at 4,676,809 to 4,678,323 _RS20795 PFLU_RS20800: PFLU_RS20800 - HAD hydrolase-like protein, at 4,678,355 to 4,679,038 _RS20800 PFLU_RS20805: PFLU_RS20805 - AraC family transcriptional regulator, at 4,679,274 to 4,680,170 _RS20805 PFLU_RS20810: PFLU_RS20810 - SDR family oxidoreductase, at 4,680,309 to 4,681,052 _RS20810 PFLU_RS20815: PFLU_RS20815 - extradiol dioxygenase, at 4,681,070 to 4,681,471 _RS20815
Group Condition PFLU_RS20795 PFLU_RS20800 PFLU_RS20805 PFLU_RS20810 PFLU_RS20815
nitrogen source NAG (N); with MOPS -0.2 -0.8 -0.7 +0.2 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.4 +0.1 -0.6 -0.9
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.5 -0.4 -0.1 +0.2
carbon source L-Lysine (C) -0.2 -0.1 +0.1 +0.2 -1.1
carbon source p-Coumaric 2 mM (C) +0.1 -0.4 -0.6 +0.1 -0.2
carbon source Phloretic Acid 2 mM (C) +0.2 -0.5 -0.5 -0.4 +0.3
carbon source caffeic 2 mM (C) -0.3 +0.2 -0.4 -0.6 +0.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.2 -0.7 +0.1 -0.3 +0.3
no stress control L-Glutamine (C)(N); with TAPS +0.3 -0.2 -0.2 -0.4 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.1 -1.0 +0.2 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.4 -0.2 -0.2 -0.5
no stress control Glycine betaine (C)(N); with MOPS -0.2 -0.5 -0.3 +0.2 +0.2
pH Growth at pH9 and (C) Trisodium citrate +0.2 -0.8 -0.2 +0.2 +0.1
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride -0.2 -0.3 -0.3 +0.4 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 -0.5 -0.3 +0.3 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 -0.3 -0.1 +0.5 -0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 -0.4 +0.7 -0.2 -0.0
stress L-Glutamine (C)(N); with TAPS; with chloride +0.1 +0.0 -0.7 +0.0 +0.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -0.3 -0.2 -0.1 +0.7
carbon source 4-Guanidinobutyric (C) +0.4 +0.1 +0.3 -0.6 +0.1
no stress control L-Glutamine (C)(N); with MOPS +0.2 -0.7 -0.5 +0.7 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.0 -0.1 -0.5 +0.5 +0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.3 -0.4 +0.6 -0.1
stress Betaine (C)(N); with TAPS; with chloride +0.2 +0.0 -0.4 +0.3 +0.4
carbon source L-Valine 10 mM (C) -0.0 -0.3 +0.3 +0.3 +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -0.2 -0.1 +0.3 +0.8
stress Betaine (C)(N); with TAPS; with chloride +0.8 -0.6 +0.4 +0.4 -0.1
carbon source Inosine (C) +0.2 -0.1 +0.3 -0.2 +0.7
carbon source L-Valine (C) +0.4 +0.2 +0.6 +0.4 -0.0
stress Betaine (C)(N); with MOPS; with chloride +0.1 +0.6 +0.6 +0.4 +0.2
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