Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20760 and PFLU_RS20765 are separated by 128 nucleotidesPFLU_RS20765 and PFLU_RS20770 are separated by 2 nucleotidesPFLU_RS20770 and PFLU_RS20775 are separated by 85 nucleotidesPFLU_RS20775 and PFLU_RS20780 are separated by 335 nucleotides PFLU_RS20760: PFLU_RS20760 - hypothetical protein, at 4,670,629 to 4,671,570 _RS20760 PFLU_RS20765: PFLU_RS20765 - hypothetical protein, at 4,671,699 to 4,672,130 _RS20765 PFLU_RS20770: PFLU_RS20770 - membrane protein, at 4,672,133 to 4,672,558 _RS20770 PFLU_RS20775: PFLU_RS20775 - zinc-dependent alcohol dehydrogenase family protein, at 4,672,644 to 4,673,633 _RS20775 PFLU_RS20780: PFLU_RS20780 - hypothetical protein, at 4,673,969 to 4,674,208 _RS20780
Group Condition PFLU_RS20760 PFLU_RS20765 PFLU_RS20770 PFLU_RS20775 PFLU_RS20780
carbon source p-Coumaric 2 mM (C) -0.8 -4.7 -0.5 +0.3 +0.3
carbon source Inosine (C) -0.3 -4.6 -0.4 +0.0 +0.4
carbon source m-Inositol (C) -0.9 -3.3 -0.6 +0.1 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -1.4 -1.5 -1.2 +0.3
carbon source Ferulic Acid 2 mM (C) +0.0 -1.2 -2.0 -0.3 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -1.1 -1.3 -0.9 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -2.8 -0.6 +0.2 -0.1
pH Growth at pH9 and (C) Trisodium citrate -0.2 -3.5 +0.9 -0.4 -0.3
carbon source L-Arabinose (C); with MOPS -0.4 -2.7 -0.0 -0.0 -0.2
stress Betaine (C)(N); with TAPS; with chloride -0.2 -2.4 -0.2 -0.0 -0.4
carbon source D,L-Malic Acid (C) +0.4 -2.7 -0.3 -0.5 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -2.6 -0.7 -0.7 +0.2
carbon source p-Coumaric (C) 5 mM -0.6 -2.4 -0.5 +0.3 +0.0
pH Growth at pH6 and (C) D-Glucose -0.3 -1.7 -0.7 -0.5 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 -1.9 -0.9 -0.5 -0.2
carbon source L-Valine 10 mM (C) +0.0 -1.6 -1.0 -0.5 -0.0
carbon source Shikimic Acid (C) -0.1 -3.1 +0.4 -0.1 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +0.3 -2.6 -0.6 -0.0
carbon source Trisodium citrate (C) -0.2 -2.4 +0.2 -0.3 -0.3
carbon source Phloretic Acid 2 mM (C) -0.5 -2.9 +0.2 +0.6 +0.0
carbon source NAG (C) -0.3 -2.4 +0.3 +0.0 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.9 -1.6 +0.7 -0.0 -0.5
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.1 -2.5 +0.2 +0.5 -0.2
temperature Growth at 25C; with MOPS -0.2 -2.0 +0.3 +0.4 -0.5
carbon source succinate (C) -0.2 -1.8 +0.7 -0.2 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 +0.5 -0.9 -1.0 -0.5
stress L-Glutamine (C)(N); with MOPS; with chloride +0.2 -2.2 +0.3 +0.5 +0.1
stress Betaine (C)(N); with TAPS; with chloride -0.6 +0.7 -1.4 +0.4 +0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 +1.0 -1.5 +0.4 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.2 +1.5 +0.4 +0.7 -0.4
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