Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20720 and PFLU_RS20725 are separated by 195 nucleotidesPFLU_RS20725 and PFLU_RS20730 overlap by 4 nucleotidesPFLU_RS20730 and PFLU_RS20735 are separated by 213 nucleotidesPFLU_RS20735 and PFLU_RS31725 are separated by 43 nucleotides PFLU_RS20720: PFLU_RS20720 - ABC transporter ATP-binding protein, at 4,665,598 to 4,666,362 _RS20720 PFLU_RS20725: PFLU_RS20725 - GNAT family N-acetyltransferase, at 4,666,558 to 4,667,055 _RS20725 PFLU_RS20730: PFLU_RS20730 - hypothetical protein, at 4,667,052 to 4,667,276 _RS20730 PFLU_RS20735: PFLU_RS20735 - hypothetical protein, at 4,667,490 to 4,667,924 _RS20735 PFLU_RS31725: PFLU_RS31725 - LysR family transcriptional regulator, at 4,667,968 to 4,668,084 _RS31725
Group Condition PFLU_RS20720 PFLU_RS20725 PFLU_RS20730 PFLU_RS20735 PFLU_RS31725
carbon source m-Inositol (C) -0.7 -0.0 -4.2 -0.1 N.D.
carbon source D-Xylose (C) -1.1 +0.3 -4.3 +0.2 N.D.
carbon source 4-hydroxyphenylacetic 2 mM (C) -0.2 +0.0 -4.7 +0.1 N.D.
pH Growth at pH8 and (C) Trisodium citrate -0.4 -0.7 -2.8 -0.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.1 -0.3 -3.4 +0.2 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -0.7 -3.7 +0.0 N.D.
temperature Growth at 25C -1.3 -0.2 -3.1 +0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 +0.0 -3.5 +0.1 N.D.
no stress control Glucose (C) and nitrate (N); with MOPS -1.1 -0.0 -2.9 -0.1 N.D.
carbon source Xanthosine (C) -0.5 -0.0 -3.4 -0.2 N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.6 -0.1 -3.8 -0.7 N.D.
carbon source Ferulic Acid 2 mM (C) -0.4 -0.1 -3.2 -0.1 N.D.
no stress control Glycine betaine (C)(N); with TAPS -0.5 +0.0 -3.5 +0.3 N.D.
nitrogen source NAG (N); with MOPS -0.8 +0.3 -2.9 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -1.0 +0.2 -2.8 -0.1 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.5 -0.1 -2.9 -0.1 N.D.
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.3 -0.3 -3.5 -0.1 N.D.
pH Growth at pH6 and (C) D-Glucose -0.1 -0.2 -2.8 -0.3 N.D.
carbon source L-Valine 10 mM (C) -0.5 -0.1 -2.6 -0.1 N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.2 +0.2 -3.1 -0.2 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 +0.0 -2.3 -0.6 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 -0.1 -3.1 -0.3 N.D.
stress Betaine (C)(N); with MOPS; with chloride -1.1 -0.0 -2.3 +0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +0.0 -3.4 +0.2 N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.4 -0.1 -2.6 -0.2 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 +0.5 -2.4 -0.0 N.D.
carbon source Cytidine 10 mM (C) +0.6 +0.2 -2.3 +0.2 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.2 -2.1 +0.3 N.D.
carbon source L-Valine 10 mM (C) +1.0 +0.1 -1.5 -0.6 N.D.
stress Glucose (C) and Betaine (N); with TAPS; with chloride -1.4 +0.1 +1.3 -0.5 N.D.
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