Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20335 and PFLU_RS20340 are separated by 144 nucleotidesPFLU_RS20340 and PFLU_RS20345 are separated by 171 nucleotidesPFLU_RS20345 and PFLU_RS20350 are separated by 33 nucleotidesPFLU_RS20350 and PFLU_RS20355 are separated by 25 nucleotides PFLU_RS20335: PFLU_RS20335 - hypothetical protein, at 4,592,917 to 4,593,237 _RS20335 PFLU_RS20340: PFLU_RS20340 - hypothetical protein, at 4,593,382 to 4,593,690 _RS20340 PFLU_RS20345: PFLU_RS20345 - hypothetical protein, at 4,593,862 to 4,594,074 _RS20345 PFLU_RS20350: PFLU_RS20350 - nucleoside hydrolase, at 4,594,108 to 4,595,136 _RS20350 PFLU_RS20355: PFLU_RS20355 - D-ribose pyranase, at 4,595,162 to 4,595,566 _RS20355
Group Condition PFLU_RS20335 PFLU_RS20340 PFLU_RS20345 PFLU_RS20350 PFLU_RS20355
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -2.8 -0.4 -1.7 -0.3 N.D.
stress Betaine (C)(N); with TAPS; with chloride -1.5 -0.2 -2.0 -0.3 N.D.
carbon source L-Carnitine (C) -2.1 -0.2 -1.6 +0.1 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -2.5 -0.0 -0.9 -0.2 N.D.
carbon source Sucrose 5 mM (C) -1.3 +0.1 -2.0 -0.2 N.D.
carbon source propionate 20 mM (C) -2.7 +0.0 -0.2 -0.2 N.D.
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -2.6 -0.1 -0.3 +0.1 N.D.
carbon source D-(+)-Galactosamine 10 mM (C) -2.3 +0.2 -0.6 -0.1 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.3 -0.1 -1.2 -0.2 N.D.
carbon source propionate 20 mM (C) -1.0 -0.3 -1.0 -0.4 N.D.
pH Growth at pH7 and (C) D-Glucose -3.3 +0.3 +0.3 +0.1 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 +0.2 -0.1 -0.2 N.D.
carbon source L-Arabinose (C) -2.2 +0.2 -0.2 -0.2 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -2.2 -0.8 +0.6 -0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -2.0 +0.1 -0.4 -0.1 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.5 -0.3 -0.9 +0.4 N.D.
stress Betaine (C)(N); with MOPS; with chloride -1.7 +0.4 -0.7 -0.2 N.D.
no stress control Glycine betaine (C)(N); with TAPS -1.8 -0.4 -0.2 +0.4 N.D.
carbon source Choline chloride 10 mM (C) +0.6 -0.4 -1.7 -0.3 N.D.
stress Betaine (C)(N); with MOPS; with chloride -1.3 -0.4 +0.4 -0.5 N.D.
carbon source 4-Aminobutyric (C) -2.0 +0.1 +0.5 -0.2 N.D.
carbon source L-Valine 10 mM (C) -1.5 -0.5 +0.6 -0.2 N.D.
carbon source acetate 30 mM (C) +0.4 +0.6 -1.8 -0.4 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -2.0 +0.0 +1.2 -0.4 N.D.
carbon source Inosine (C) +0.4 +0.5 -0.9 -1.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.5 +0.4 +0.9 -0.3 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.9 +0.4 +1.0 -0.0 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 -0.2 -1.2 +0.0 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.0 +0.7 +0.8 -0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.9 +0.4 +1.3 -0.1 N.D.
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