Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS20310 and PFLU_RS20315 are separated by 60 nucleotidesPFLU_RS20315 and PFLU_RS20320 are separated by 17 nucleotidesPFLU_RS20320 and PFLU_RS20325 are separated by 367 nucleotidesPFLU_RS20325 and PFLU_RS20330 are separated by 289 nucleotides PFLU_RS20310: PFLU_RS20310 - 50S ribosomal protein L35, at 4,588,931 to 4,589,125 _RS20310 PFLU_RS20315: PFLU_RS20315 - translation initiation factor IF-3, at 4,589,186 to 4,589,719 _RS20315 PFLU_RS20320: PFLU_RS20320 - threonine--tRNA ligase, at 4,589,737 to 4,591,659 _RS20320 PFLU_RS20325: PFLU_RS20325 - hypothetical protein, at 4,592,027 to 4,592,341 _RS20325 PFLU_RS20330: PFLU_RS20330 - cold-shock protein, at 4,592,631 to 4,592,843 _RS20330
Group Condition PFLU_RS20310 PFLU_RS20315 PFLU_RS20320 PFLU_RS20325 PFLU_RS20330
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -3.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -3.4
carbon source L-Arabinose (C); with MOPS N.D. N.D. N.D. N.D. -3.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -3.1
no stress control Glycine betaine (C)(N); with TAPS N.D. N.D. N.D. N.D. -3.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs N.D. N.D. N.D. N.D. -3.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs N.D. N.D. N.D. N.D. -3.0
carbon source L-Arabinose (C); with MOPS N.D. N.D. N.D. N.D. -2.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -2.9
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. N.D. N.D. N.D. -2.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -2.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. N.D. N.D. -2.7
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. N.D. N.D. -2.6
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride N.D. N.D. N.D. N.D. -2.4
no stress control Glycine betaine (C)(N); with MOPS N.D. N.D. N.D. N.D. -2.3
carbon source L-tyrosine 10 mM (C) N.D. N.D. N.D. N.D. +2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride N.D. N.D. N.D. N.D. +2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +2.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +2.7
carbon source 4-Aminobutyric (C) N.D. N.D. N.D. N.D. +2.7
carbon source 4-Aminobutyric (C) N.D. N.D. N.D. N.D. +2.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +2.7
temperature shift Temperature shift 30_to_34 N.D. N.D. N.D. N.D. +2.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +2.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +3.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +3.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +3.0
carbon source acetate 30 mM (C) N.D. N.D. N.D. N.D. +3.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. N.D. N.D. +3.1
carbon source acetate 30 mM (C) N.D. N.D. N.D. N.D. +3.7
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