Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS19800 and PFLU_RS19805 are separated by 1 nucleotidesPFLU_RS19805 and PFLU_RS19810 are separated by 95 nucleotidesPFLU_RS19810 and PFLU_RS19815 overlap by 11 nucleotidesPFLU_RS19815 and PFLU_RS19820 overlap by 4 nucleotides PFLU_RS19800: PFLU_RS19800 - cupin domain-containing protein, at 4,481,637 to 4,482,350 _RS19800 PFLU_RS19805: PFLU_RS19805 - LysR family transcriptional regulator, at 4,482,352 to 4,483,236 _RS19805 PFLU_RS19810: PFLU_RS19810 - DSD1 family PLP-dependent enzyme, at 4,483,332 to 4,484,468 _RS19810 PFLU_RS19815: PFLU_RS19815 - FAD-binding oxidoreductase, at 4,484,458 to 4,485,642 _RS19815 PFLU_RS19820: PFLU_RS19820 - GNAT family N-acetyltransferase, at 4,485,639 to 4,486,484 _RS19820
Group Condition PFLU_RS19800 PFLU_RS19805 PFLU_RS19810 PFLU_RS19815 PFLU_RS19820
stress Betaine (C)(N); with TAPS; with chloride -1.4 -1.7 +0.0 +0.0 -0.4
carbon source L-Valine 10 mM (C) -0.3 -0.8 -0.4 -0.5 -0.7
carbon source L-Carnitine (C) -1.2 -0.4 -0.2 -0.4 -0.4
carbon source 4-Aminobutyric (C) -1.6 -0.9 -0.2 -0.2 +0.3
stress Betaine (C)(N); with TAPS; with chloride -1.2 -1.3 -0.1 +0.0 +0.4
carbon source propionate 20 mM (C) +0.3 -1.5 -0.1 +0.3 -0.8
no stress control Glycine betaine (C)(N); with TAPS +0.1 +0.6 +0.0 -0.7 -1.6
carbon source L-Valine 10 mM (C) -1.1 -1.3 -0.0 -0.3 +1.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.9 -0.7 -0.4 -0.1 +0.6
carbon source L-Valine (C) +0.8 -1.1 +0.4 -0.2 -1.3
carbon source D-Glucuronic (C) +0.7 -2.0 +0.1 -0.1 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.9 -0.2 -0.7 +0.9
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.3 -1.7 +0.5 +0.3 -0.5
carbon source L-Carnitine (C) -1.6 +0.8 -0.5 +0.3 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.5 -1.8 +0.2 -0.0 +0.4
carbon source caffeic 2 mM (C) +0.3 -1.3 -0.2 -0.2 +0.7
no stress control Growth with no stress; with MOPS -0.3 +0.6 +0.2 +0.2 -1.3
nitrogen source NAG (N); with MOPS +0.7 +0.3 +0.2 +0.0 -1.5
temperature Growth at 25C; with MOPS +0.5 +0.4 +0.2 +0.3 -1.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.0 -1.3 +0.4 -0.2 +0.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -0.8 -0.4 +0.1 +0.8
carbon source NAG (C) -0.9 +0.7 -0.4 +0.0 +1.1
carbon source Xanthosine (C) +0.8 +1.0 -0.2 +0.4 -1.3
carbon source acetate 30 mM (C) +0.5 -0.3 -0.3 -0.4 +1.3
pH Growth at pH9 and (C) Trisodium citrate +0.8 +0.9 -0.4 -0.1 -0.5
carbon source Phloretic Acid 2 mM (C) +0.5 -0.5 +0.4 -0.1 +1.1
carbon source Quinic Acid (C) +0.4 +1.4 -0.5 +0.0 +0.5
carbon source Shikimic Acid (C) +1.2 +0.4 -0.1 -0.4 +0.7
stress Betaine (C)(N); with MOPS; with chloride +0.8 +0.8 -0.4 +0.1 +0.6
temperature Growth at 25C +1.2 +1.0 +0.6 +0.3 -0.5
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