Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS19335 and PFLU_RS19340 are separated by 167 nucleotidesPFLU_RS19340 and PFLU_RS19345 are separated by 57 nucleotidesPFLU_RS19345 and PFLU_RS19350 are separated by 179 nucleotidesPFLU_RS19350 and PFLU_RS19355 are separated by 194 nucleotides PFLU_RS19335: PFLU_RS19335 - NAD(P)/FAD-dependent oxidoreductase, at 4,372,171 to 4,373,415 _RS19335 PFLU_RS19340: PFLU_RS19340 - MBL fold metallo-hydrolase, at 4,373,583 to 4,374,446 _RS19340 PFLU_RS19345: PFLU_RS19345 - methyl-accepting chemotaxis protein, at 4,374,504 to 4,376,129 _RS19345 PFLU_RS19350: PFLU_RS19350 - Lrp/AsnC family transcriptional regulator, at 4,376,309 to 4,376,791 _RS19350 PFLU_RS19355: PFLU_RS19355 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha, at 4,376,986 to 4,378,221 _RS19355
Group Condition PFLU_RS19335 PFLU_RS19340 PFLU_RS19345 PFLU_RS19350 PFLU_RS19355
carbon source L-Isoleucine (C) 10 mM -0.0 +0.1 +0.1 -4.4 -4.8
carbon source Citraconic 20 mM (C) +0.1 -0.1 -0.0 -4.6 -4.4
carbon source Citraconic 20 mM (C) +0.1 -0.2 +0.1 -4.1 -4.3
carbon source Citraconic 20 mM (C) +0.1 -0.2 -0.1 -3.9 -4.1
carbon source L-Isoleucine (C) 10 mM +0.0 +0.1 +0.1 -3.6 -4.8
carbon source L-Valine 10 mM (C) -0.0 +0.2 -0.3 -3.8 -3.6
carbon source L-Isoleucine (C) 10 mM -0.0 +0.2 +0.1 -3.3 -4.0
carbon source L-Valine 10 mM (C) +0.2 +0.0 -0.1 -3.5 -3.5
carbon source L-Isoleucine (C) +0.2 -0.0 +0.1 -3.7 -3.1
carbon source L-Valine 10 mM (C) +0.0 +0.2 -0.1 -3.4 -3.1
carbon source L-Valine (C) -0.1 -0.4 +0.3 -2.8 -3.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.2 +0.0 -0.2 -2.7 -3.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.3 +0.2 +0.1 -2.5 -3.4
carbon source L-Isoleucine (C) +0.2 -0.2 +0.2 -2.6 -2.5
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.0 +0.0 -0.1 -0.9 -2.9
carbon source L-Valine (C) +0.0 -0.4 +0.4 -1.4 -2.3
carbon source L-Isoleucine (C) +0.1 +0.1 +0.2 -2.0 -2.0
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM +0.0 +0.1 +0.0 -1.2 -2.5
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS -0.1 -0.1 +0.1 -0.8 -2.6
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.0 +0.1 +0.1 -0.9 -2.8
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM +0.0 +0.2 -0.0 -2.1 -1.3
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.0 +0.1 +0.0 -0.6 -2.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -0.2 -0.2 -1.8 -0.9
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS -0.0 -0.0 +0.0 -0.2 -2.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.1 -0.1 +0.1 -1.6 -1.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.0 -0.0 -0.2 -0.7 -1.6
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM +0.1 +0.2 +0.1 -1.0 -1.8
carbon source 4-Hydroxybenzoic Acid (C) 1.5 mM +0.0 +0.1 +0.1 -0.9 -1.6
carbon source Phloretic Acid 2 mM (C) +0.0 +0.1 +0.2 -1.8 -0.8
carbon source p-Coumaric 2 mM (C) -0.3 +0.1 +0.3 -1.2 -0.6
remove
PFLU_RS19335
plot		 remove
PFLU_RS19340
plot		 remove
PFLU_RS19345		 remove
PFLU_RS19350
plot		 remove
PFLU_RS19355
plot