Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS19130 and PFLU_RS19135 are separated by 89 nucleotidesPFLU_RS19135 and PFLU_RS19140 are separated by 118 nucleotidesPFLU_RS19140 and PFLU_RS19145 overlap by 54 nucleotidesPFLU_RS19145 and PFLU_RS19150 are separated by 97 nucleotides PFLU_RS19130: PFLU_RS19130 - DUF2242 domain-containing protein, at 4,326,126 to 4,326,908 _RS19130 PFLU_RS19135: PFLU_RS19135 - LysR family transcriptional regulator, at 4,326,998 to 4,327,897 _RS19135 PFLU_RS19140: PFLU_RS19140 - MFS transporter, at 4,328,016 to 4,329,221 _RS19140 PFLU_RS19145: PFLU_RS19145 - GNAT family N-acetyltransferase, at 4,329,168 to 4,329,692 _RS19145 PFLU_RS19150: PFLU_RS19150 - peptidyl-prolyl cis-trans isomerase, at 4,329,790 to 4,331,664 _RS19150
Group Condition PFLU_RS19130 PFLU_RS19135 PFLU_RS19140 PFLU_RS19145 PFLU_RS19150
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -0.3 -0.1 -0.1 N.D.
carbon source Xanthosine (C) -0.7 -0.4 -0.2 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -0.6 -0.3 +0.2 N.D.
carbon source Phloretic Acid 2 mM (C) -0.2 -0.9 +0.1 -0.2 N.D.
carbon source L-Valine 10 mM (C) +0.1 -0.9 +0.0 -0.3 N.D.
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS -0.7 -0.2 +0.1 -0.2 N.D.
stress L-Glutamine (C)(N); with TAPS; with chloride +0.1 -0.3 -0.2 -0.4 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -0.0 -0.0 +0.3 N.D.
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.1 -0.6 -0.3 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.9 -0.7 -0.1 -0.6 N.D.
carbon source Inosine (C) +0.3 -1.2 +0.1 +0.6 N.D.
carbon source Xanthosine (C) +0.4 -0.2 -0.2 -0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.5 +0.0 -0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 -0.6 -0.1 +0.2 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -0.6 +0.0 +0.1 N.D.
carbon source Shikimic Acid (C) +0.8 -0.8 +0.1 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.6 -0.1 -0.3 +0.1 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 -0.3 -0.1 +0.4 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.8 -0.1 -0.2 +0.0 N.D.
carbon source L-Valine (C) +0.5 +0.4 -0.2 -0.1 N.D.
pH Growth at pH7 and (C) D-Glucose +0.5 -0.2 -0.0 +0.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +0.4 -0.2 -0.0 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.8 -0.3 +0.1 +0.1 N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.6 +0.1 +0.2 -0.2 N.D.
carbon source L-Carnitine (C) +0.7 -0.3 +0.3 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 +0.5 -0.1 +0.6 N.D.
carbon source L-Valine (C) +0.5 -0.1 +0.2 +0.3 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +0.5 -0.2 +0.2 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 +0.4 +0.1 +0.4 N.D.
nitrogen source nitrate (N); with MOPS +0.5 +0.4 +0.1 +0.3 N.D.
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