Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS18505 and PFLU_RS18510 are separated by 0 nucleotidesPFLU_RS18510 and PFLU_RS18515 are separated by 16 nucleotidesPFLU_RS18515 and PFLU_RS18520 overlap by 1 nucleotidesPFLU_RS18520 and PFLU_RS18525 are separated by 23 nucleotides PFLU_RS18505: PFLU_RS18505 - uroporphyrinogen-III C-methyltransferase, at 4,187,597 to 4,188,991 _RS18505 PFLU_RS18510: PFLU_RS18510 - serine--tRNA ligase, at 4,188,992 to 4,190,272 _RS18510 PFLU_RS18515: PFLU_RS18515 - fluoride efflux transporter CrcB, at 4,190,289 to 4,190,663 _RS18515 PFLU_RS18520: PFLU_RS18520 - replication-associated recombination protein A, at 4,190,663 to 4,191,985 _RS18520 PFLU_RS18525: PFLU_RS18525 - outer membrane lipoprotein chaperone LolA, at 4,192,009 to 4,192,632 _RS18525
Group Condition PFLU_RS18505 PFLU_RS18510 PFLU_RS18515 PFLU_RS18520 PFLU_RS18525
carbon source caffeic 2 mM (C) -2.4 N.D. -3.4 -0.5 N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.5 N.D. -3.0 -0.7 N.D.
stress Betaine (C)(N); with MOPS; with chloride -2.8 N.D. -2.7 -0.3 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -4.0 N.D. -1.8 +0.3 N.D.
carbon source NAG (C) -4.3 N.D. -0.7 -0.3 N.D.
pH Growth at pH7 and (C) Trisodium citrate -3.6 N.D. -1.6 -0.0 N.D.
carbon source Fumarate (C) -3.3 N.D. -2.0 +0.1 N.D.
carbon and nitrogen source NAG carbon and (N) -3.3 N.D. -1.9 +0.1 N.D.
temperature Growth at 25C -3.5 N.D. -1.6 +0.0 N.D.
stress L-Glutamine (C)(N); with MOPS; with chloride -3.2 N.D. -1.5 -0.2 N.D.
carbon source acetate (C) -2.8 N.D. -2.0 -0.1 N.D.
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS -2.8 N.D. -2.3 +0.2 N.D.
carbon source L-Carnitine 10 mM (C) -3.0 N.D. -1.7 -0.2 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -3.1 N.D. -1.5 -0.3 N.D.
temperature shift Temperature shift 30_to_25 -3.9 N.D. -0.9 -0.0 N.D.
carbon and nitrogen source NAG carbon and (N) -3.7 N.D. -1.2 +0.1 N.D.
nitrogen source NAG (N); with MOPS -3.3 N.D. -1.5 +0.0 N.D.
temperature shift Temperature shift 10_to_25 -3.8 N.D. -0.8 -0.1 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -3.5 N.D. -1.2 -0.1 N.D.
carbon source Sucrose 5 mM (C) -2.8 N.D. -1.9 +0.1 N.D.
carbon source Shikimic Acid (C) -2.1 N.D. -2.5 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -3.2 N.D. -1.4 +0.2 N.D.
nitrogen source nitrite (N) -3.7 N.D. +0.8 -0.1 N.D.
carbon and nitrogen source NAG carbon and (N); with MOPS -3.9 N.D. +1.1 -0.0 N.D.
carbon source NAG (C); with MOPS -3.9 N.D. +0.8 +0.2 N.D.
carbon source NAG (C) -3.6 N.D. +1.0 -0.2 N.D.
pH Growth at pH6 and (C) D-Glucose -3.6 N.D. +1.0 -0.2 N.D.
nitrogen source NAG (N); with MOPS -3.6 N.D. +1.1 -0.1 N.D.
pH Growth at pH7 and (C) Trisodium citrate -3.5 N.D. +1.2 -0.2 N.D.
carbon source D-Glucose (C); with MOPS -3.6 N.D. +1.1 +0.0 N.D.
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