Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS18385 and PFLU_RS18390 overlap by 1 nucleotidesPFLU_RS18390 and PFLU_RS18395 overlap by 4 nucleotidesPFLU_RS18395 and PFLU_RS18400 are separated by 83 nucleotidesPFLU_RS18400 and PFLU_RS18405 are separated by 135 nucleotides PFLU_RS18385: PFLU_RS18385 - tetraacyldisaccharide 4'-kinase, at 4,167,057 to 4,168,067 _RS18385 PFLU_RS18390: PFLU_RS18390 - biopolymer transporter ExbD, at 4,168,067 to 4,168,495 _RS18390 PFLU_RS18395: PFLU_RS18395 - MotA/TolQ/ExbB proton channel family protein, at 4,168,492 to 4,169,127 _RS18395 PFLU_RS18400: PFLU_RS18400 - DNA internalization-related competence protein ComEC/Rec2, at 4,169,211 to 4,171,436 _RS18400 PFLU_RS18405: PFLU_RS18405 - DUF2062 domain-containing protein, at 4,171,572 to 4,172,087 _RS18405
Group Condition PFLU_RS18385 PFLU_RS18390 PFLU_RS18395 PFLU_RS18400 PFLU_RS18405
stress malate (C) and Ammonium chloride (N); with MOPS N.D. N.D. -4.0 -0.3 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -4.1 -0.2 -0.1
stress malate (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.7 -0.1 -0.5
no stress control Glucose (C) and nitrate (N); with TAPS N.D. N.D. -3.6 -0.2 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. -4.2 -0.0 +0.1
stress Sucrose (C) and Ammonium chloride (N); with MOPS N.D. N.D. -4.1 -0.1 +0.2
no stress control Sucrose (C) and Glycine betaine (N); with TAPS N.D. N.D. -4.2 -0.1 +0.2
stress Glucose (C) and Glycine betaine (N); with MOPS; with chloride N.D. N.D. -3.8 +0.0 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -4.1 +0.0 -0.1
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -4.0 -0.1 +0.1
no stress control Glucose (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.6 -0.2 -0.1
stress malate (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.0 -0.4 -0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -4.0 -0.0 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -3.8 +0.1 -0.2
stress Sucrose (C) and Ammonium chloride (N); with MOPS N.D. N.D. -3.6 -0.1 +0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -3.9 +0.0 +0.2
stress Sucrose (C) and L-Glutamine (N); with TAPS; with PEG N.D. N.D. -3.7 +0.1 -0.1
no stress control Betaine (C)(N); with TAPS N.D. N.D. -3.4 +0.1 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -4.0 +0.3 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -3.5 -0.1 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. -3.6 +0.1 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +3.5 -0.3 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +4.8 -0.4 -0.7
carbon source p-Coumaric (C) 5 mM N.D. N.D. +3.6 +0.2 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +4.6 -0.5 +0.0
carbon source p-Coumaric (C) 5 mM N.D. N.D. +4.4 -0.1 +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +5.3 -0.5 -0.3
carbon source p-Coumaric (C) 5 mM N.D. N.D. +4.4 +0.2 +0.2
carbon source Ferulic Acid (C) 1.5 mM N.D. N.D. +5.8 -0.3 -0.1
carbon source Ferulic Acid (C) 1.5 mM N.D. N.D. +7.1 -0.0 +0.0
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