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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS18145 and PFLU_RS18150 are separated by 245 nucleotides
PFLU_RS18150 and PFLU_RS18155 are separated by 1505 nucleotides
PFLU_RS18155 and PFLU_RS18160 are separated by 5 nucleotides
PFLU_RS18160 and PFLU_RS18165 overlap by 11 nucleotides
PFLU_RS18145: PFLU_RS18145 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,116,521 to 4,117,459
_RS18145
PFLU_RS18150: PFLU_RS18150 - aliphatic sulfonate ABC transporter substrate-binding protein, at 4,117,705 to 4,118,649
_RS18150
PFLU_RS18155: PFLU_RS18155 - glycerol kinase, at 4,120,155 to 4,121,630
_RS18155
PFLU_RS18160: PFLU_RS18160 - transketolase, at 4,121,636 to 4,122,568
_RS18160
PFLU_RS18165: PFLU_RS18165 - transketolase, at 4,122,558 to 4,123,394
_RS18165
Group
Condition
PFLU
_RS18145
PFLU
_RS18150
PFLU
_RS18155
PFLU
_RS18160
PFLU
_RS18165
carbon source
NAG (C)
-0.2
+0.1
-0.7
-2.3
-2.6
carbon and nitrogen source
NAG carbon and (N)
-0.5
-0.1
-0.6
-0.9
-2.1
carbon source
NAG (C)
+0.1
+0.0
-0.2
-1.3
-2.2
carbon and nitrogen source
NAG carbon and (N)
+0.0
-0.3
-0.3
-1.0
-2.1
carbon source
NAG (C)
-0.2
-0.3
+0.4
-1.4
-2.1
carbon source
NAG (C); with MOPS
-0.3
-0.1
-0.4
-1.4
-1.1
carbon and nitrogen source
NAG carbon and (N)
+0.1
-0.3
+0.2
-1.4
-1.7
stress
malate (C) and Ammonium chloride (N); with TAPS
-0.3
-0.1
-0.1
-0.8
-1.6
carbon source
NAG (C); with MOPS
+0.1
-0.1
-0.8
-0.8
-1.2
carbon source
NAG (C) 10 mM
-0.1
+0.2
-0.1
-1.2
-1.6
carbon source
NAG (C) 10 mM
-0.2
+0.1
+0.0
-0.9
-1.4
carbon source
NAG 10 mM (C)
-0.2
-0.3
-0.2
-0.8
-1.0
stress
malate (C) and Ammonium chloride (N); with TAPS
-0.1
-0.1
-0.3
-0.6
-1.4
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride
+0.0
+0.0
-0.8
-1.0
-0.7
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.0
+0.1
-0.3
-0.6
-1.6
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.3
-0.1
-1.3
-0.5
-0.6
carbon source
NAG (C)
-0.0
+0.1
-0.5
-0.6
-1.3
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-0.0
+0.0
+0.2
-0.2
-2.2
carbon source
NAG (C)
+0.1
-0.5
+0.0
-0.9
-1.0
carbon source
propionate 20 mM (C)
-0.5
-0.5
-1.2
-0.2
+0.2
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
+0.2
-0.1
-0.4
-0.8
-1.1
carbon source
NAG (C) 10 mM
-0.2
+0.1
+0.1
-0.8
-1.4
stress
malate (C) and Ammonium chloride (N); with TAPS
+0.1
-0.0
+0.2
-0.5
-1.8
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.0
-0.5
+0.4
+0.0
-1.8
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.3
-0.5
+0.4
-0.4
-0.9
stress
malate (C) and Ammonium chloride (N); with TAPS
+0.2
-0.1
+0.4
-0.6
-1.6
carbon source
Quinic Acid (C)
+0.4
-0.6
-1.5
+0.1
+0.2
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+0.5
-0.3
+0.5
-0.1
-1.9
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
-0.2
+0.2
+0.8
-0.9
-0.9
pH
Growth at pH9 and (C) Trisodium citrate
-0.6
-0.1
+1.1
+0.4
-0.4
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