Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS17835 and PFLU_RS17840 are separated by 246 nucleotidesPFLU_RS17840 and PFLU_RS17845 are separated by 180 nucleotidesPFLU_RS17845 and PFLU_RS17850 overlap by 4 nucleotidesPFLU_RS17850 and PFLU_RS17855 overlap by 4 nucleotides PFLU_RS17835: PFLU_RS17835 - winged helix-turn-helix domain-containing protein, at 4,049,964 to 4,050,623 _RS17835 PFLU_RS17840: PFLU_RS17840 - undecaprenyl-phosphate glucose phosphotransferase, at 4,050,870 to 4,052,261 _RS17840 PFLU_RS17845: PFLU_RS17845 - YjbH domain-containing protein, at 4,052,442 to 4,054,517 _RS17845 PFLU_RS17850: PFLU_RS17850 - hypothetical protein, at 4,054,514 to 4,055,284 _RS17850 PFLU_RS17855: PFLU_RS17855 - YjbF family lipoprotein, at 4,055,281 to 4,055,925 _RS17855
Group Condition PFLU_RS17835 PFLU_RS17840 PFLU_RS17845 PFLU_RS17850 PFLU_RS17855
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.7 -0.2 -0.1 -2.9
carbon source p-Coumaric 2 mM (C) -0.3 -0.1 -0.1 -1.1 -1.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.9 -0.3 -0.1 -0.2 -1.7
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.3 +0.0 +0.2 -2.4
nitrogen source NAG (N); with MOPS -0.9 -0.7 +0.1 +0.1 -1.1
pH Growth at pH6 and (C) D-Glucose -0.3 -0.5 -0.1 -0.8 -0.8
carbon source Guanosine 10 mM (C) -0.5 -0.6 +0.1 -0.6 -0.8
carbon source L-Arabinose (C) -0.0 -0.2 -0.2 +0.7 -2.4
pH Growth at pH7 and (C) D-Glucose -0.4 -0.5 +0.1 +0.7 -1.7
no stress control Sucrose (C) and Glycine betaine (N); with MOPS -0.0 +0.4 -0.1 -0.1 -1.9
stress Betaine (C)(N); with TAPS; with chloride -0.0 -0.6 -0.1 -1.6 +0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 -0.2 +0.1 +0.8 -1.5
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) +0.6 +0.1 -0.1 -1.7 -0.5
no stress control Glycine betaine (C)(N); with MOPS -0.2 -0.4 -0.0 -1.4 +0.4
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -0.0 -0.1 -0.1 -1.7 +0.6
carbon source L-Valine (C) -0.3 -0.9 -0.0 -1.2 +1.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.9 +0.5 -0.8 +0.2
carbon source NAG (C) -0.3 -0.1 -0.1 +0.9 -1.5
carbon source m-Inositol (C) +0.3 +0.4 +0.3 -0.3 -1.6
no stress control L-Glutamine (C)(N); with MOPS -0.2 -0.7 -0.4 +0.3 +1.0
carbon source caffeic 2 mM (C) +0.5 +0.5 +0.1 -1.3 +0.2
carbon source Phloretic Acid 2 mM (C) +0.1 +0.6 -0.1 -1.0 +1.2
carbon source L-Ornithine 10 mM (C) +0.3 +0.1 +0.9 +0.5 -0.9
carbon source propionate 20 mM (C) +0.7 +0.0 +0.7 -0.4 +1.2
carbon source D-(+)-Galactosamine 10 mM (C) +0.7 +0.6 +0.6 +0.5 +0.3
carbon source Inosine (C) +0.4 +0.4 -0.3 +1.7 +0.7
carbon source D-(+)-Galactosamine 10 mM (C) +0.6 +0.6 +0.7 +0.8 +0.5
carbon source L-Ornithine (C) +0.1 +0.4 +0.7 +1.5 +0.5
carbon source L-Ornithine 10 mM (C) +0.3 +0.2 +1.0 +1.2 +0.6
carbon source D-(+)-Galactosamine 10 mM (C) +0.6 +0.7 +0.7 +0.6 +0.8
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