Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS17560 and PFLU_RS17565 are separated by 126 nucleotidesPFLU_RS17565 and PFLU_RS17570 overlap by 4 nucleotidesPFLU_RS17570 and PFLU_RS17575 are separated by 7 nucleotidesPFLU_RS17575 and PFLU_RS17580 overlap by 1 nucleotides PFLU_RS17560: PFLU_RS17560 - response regulator, at 3,991,636 to 3,993,348 _RS17560 PFLU_RS17565: PFLU_RS17565 - error-prone DNA polymerase, at 3,993,475 to 3,996,546 _RS17565 PFLU_RS17570: PFLU_RS17570 - DNA polymerase Y family protein, at 3,996,543 to 3,997,955 _RS17570 PFLU_RS17575: PFLU_RS17575 - translesion DNA synthesis-associated protein ImuA, at 3,997,963 to 3,998,577 _RS17575 PFLU_RS17580: PFLU_RS17580 - repressor LexA, at 3,998,577 to 3,999,194 _RS17580
Group Condition PFLU_RS17560 PFLU_RS17565 PFLU_RS17570 PFLU_RS17575 PFLU_RS17580
stress Betaine (C)(N); with TAPS; with chloride -0.2 -1.0 -0.1 N.D. -2.6
nitrogen source NAG (N); with MOPS +0.1 +0.2 -1.6 N.D. -2.3
carbon source L-Carnitine (C) +0.0 +0.0 -0.1 N.D. -3.4
carbon source acetate 30 mM (C) +0.0 +0.5 -0.2 N.D. -3.6
carbon and nitrogen source NAG carbon and (N) -0.4 -0.1 -0.0 N.D. -2.7
pH Growth at pH8 and (C) D-Glucose -0.2 -0.1 -0.2 N.D. -2.6
temperature Growth at 25C; with MOPS +0.1 -0.3 -1.2 N.D. -1.7
stress Sucrose (C) and Ammonium chloride (N); with TAPS -0.1 -0.0 -0.8 N.D. -2.0
nitrogen source NAG (N); with MOPS +0.1 +0.2 -0.5 N.D. -2.7
pH Growth at pH7 and (C) Trisodium citrate -0.3 -0.1 -0.4 N.D. -2.0
temperature shift Temperature shift 30_to_25; with MOPS -0.2 +0.2 -0.3 N.D. -2.6
pH Growth at pH7 and (C) D-Glucose -0.2 +0.3 -0.2 N.D. -2.7
carbon source p-Coumaric (C) 5 mM +0.6 +0.0 -1.3 N.D. -2.1
stress Betaine (C)(N); with TAPS; with chloride -0.2 +0.0 -0.6 N.D. -2.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 -0.5 +0.4 N.D. -2.9
pH Growth at pH9 and (C) Trisodium citrate -0.0 -0.2 +0.3 N.D. -2.5
carbon source Shikimic Acid (C) +0.1 -0.3 +0.8 N.D. -2.9
stress Betaine (C)(N); with MOPS; with chloride -0.7 +0.0 +0.2 N.D. -1.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.8 -0.2 +0.0 N.D. -2.9
carbon source p-Coumaric (C) 5 mM +0.5 -0.2 -0.3 N.D. -2.2
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.2 +0.4 N.D. -2.0
no stress control Growth with no stress; with MOPS -0.0 +0.2 +0.4 N.D. -2.5
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.1 +0.4 N.D. -2.2
stress Betaine (C)(N); with MOPS; with chloride -0.3 -0.5 -1.6 N.D. +0.7
carbon source Choline chloride 10 mM (C) +0.7 +0.3 -0.0 N.D. -2.0
stress Betaine (C)(N); with MOPS; with chloride -1.0 -0.7 -0.0 N.D. +1.1
carbon source p-Coumaric 2 mM (C) +0.3 +0.2 +0.8 N.D. -1.8
pH Growth at pH8 and (C) Trisodium citrate +0.0 +0.4 -2.0 N.D. +1.6
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.2 +0.3 -0.3 N.D. +2.5
carbon source NAG (C) +0.3 +0.0 -0.2 N.D. +2.4
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