Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS17495 and PFLU_RS17500 are separated by 91 nucleotidesPFLU_RS17500 and PFLU_RS17505 are separated by 33 nucleotidesPFLU_RS17505 and PFLU_RS17510 are separated by 109 nucleotidesPFLU_RS17510 and PFLU_RS17515 overlap by 10 nucleotides PFLU_RS17495: PFLU_RS17495 - hypothetical protein, at 3,976,225 to 3,976,569 _RS17495 PFLU_RS17500: PFLU_RS17500 - hypothetical protein, at 3,976,661 to 3,976,997 _RS17500 PFLU_RS17505: PFLU_RS17505 - hypothetical protein, at 3,977,031 to 3,977,441 _RS17505 PFLU_RS17510: PFLU_RS17510 - helix-turn-helix transcriptional regulator, at 3,977,551 to 3,978,417 _RS17510 PFLU_RS17515: PFLU_RS17515 - ribonuclease T2, at 3,978,408 to 3,979,037 _RS17515
Group Condition PFLU_RS17495 PFLU_RS17500 PFLU_RS17505 PFLU_RS17510 PFLU_RS17515
stress Betaine (C)(N); with MOPS; with chloride -2.2 +0.8 -1.8 -1.4 -1.2
carbon source Xanthosine (C) -0.0 -1.2 -1.8 -0.5 -1.7
carbon source Phloretic Acid 2 mM (C) -4.6 +0.0 -0.3 +0.2 +0.1
stress Betaine (C)(N); with TAPS; with chloride -2.3 +0.4 -1.3 -0.2 -1.0
temperature Growth at 25C -3.5 +0.0 -0.3 -0.5 +0.2
carbon and nitrogen source NAG carbon and (N) -1.1 -1.1 -0.3 -0.4 -1.1
pH Growth at pH9 and (C) Trisodium citrate -0.9 -0.2 -0.8 -1.4 -0.4
carbon source Inosine (C) -0.4 -0.3 +0.7 -0.6 -3.1
carbon source Glycerol (C) -1.3 -0.2 -1.3 +0.1 -0.8
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -2.6 -0.3 +0.2 -0.6 -0.2
stress Betaine (C)(N); with MOPS; with chloride -1.1 -0.5 -0.7 +0.3 -1.5
carbon source Sucrose 5 mM (C) +0.3 -1.4 -1.9 +0.2 -0.6
carbon source Phloretic Acid 2 mM (C) -4.4 +0.7 +0.5 -0.0 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -0.8 +0.6 -0.2 -2.3
carbon source L-Valine 10 mM (C) -1.7 +0.2 -0.4 +0.2 -1.1
carbon source L-Carnitine (C) -2.3 -1.0 +0.6 -0.3 +0.6
carbon source p-Coumaric 2 mM (C) -1.2 -0.3 +0.1 +0.6 -1.5
carbon source L-Carnitine (C) +0.5 -0.3 -2.3 +0.4 -0.1
carbon source L-Carnitine (C) -0.7 -2.1 +1.4 +0.1 -0.1
stress L-Glutamine (C)(N); with MOPS; with chloride +0.8 -0.9 -1.9 +0.2 +0.4
stress Betaine (C)(N); with MOPS; with chloride -1.7 +1.2 -0.2 -0.3 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -2.5 +0.4 +0.4 +0.3 +0.8
stress Betaine (C)(N); with MOPS; with chloride +0.7 +1.3 -1.5 -0.9 -0.1
stress Betaine (C)(N); with MOPS; with chloride -0.6 +1.1 -1.8 +0.3 +0.9
carbon source p-Coumaric 2 mM (C) +1.4 -0.1 -1.5 +0.8 -0.5
no stress control L-Glutamine (C)(N); with MOPS +1.5 -1.1 +0.8 +0.1 -1.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.8 -0.1 +0.8 +0.4 +1.0
stress Betaine (C)(N); with MOPS; with chloride -1.8 +0.3 +0.9 +0.5 +0.8
carbon source Shikimic Acid (C) +1.8 +0.7 -0.2 +0.6 -1.0
carbon source D-Glucosamine Hydrochloride 10 mM (C) +1.7 -0.0 +0.3 -0.9 +0.9
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