Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS17355 and PFLU_RS17360 are separated by 658 nucleotidesPFLU_RS17360 and PFLU_RS17365 are separated by 46 nucleotidesPFLU_RS17365 and PFLU_RS17370 are separated by 132 nucleotidesPFLU_RS17370 and PFLU_RS17375 overlap by 26 nucleotides PFLU_RS17355: PFLU_RS17355 - creatininase family protein, at 3,946,674 to 3,947,420 _RS17355 PFLU_RS17360: PFLU_RS17360 - hypothetical protein, at 3,948,079 to 3,948,420 _RS17360 PFLU_RS17365: PFLU_RS17365 - hypothetical protein, at 3,948,467 to 3,949,111 _RS17365 PFLU_RS17370: PFLU_RS17370 - hypothetical protein, at 3,949,244 to 3,949,516 _RS17370 PFLU_RS17375: PFLU_RS17375 - glutathione transferase, at 3,949,491 to 3,950,123 _RS17375
Group Condition PFLU_RS17355 PFLU_RS17360 PFLU_RS17365 PFLU_RS17370 PFLU_RS17375
carbon source Xanthosine (C) -0.1 -1.3 -0.1 -2.6 -0.1
carbon source acetate 30 mM (C) -1.0 -1.4 -2.2 +0.8 +0.2
carbon source propionate 20 mM (C) +0.3 -0.2 -1.4 -1.8 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -0.6 -0.4 -0.6 +0.2
nitrogen source NAG (N); with MOPS +0.6 -0.8 -0.1 -2.2 -0.2
carbon source propionate 20 mM (C) -0.2 -1.5 -1.6 +0.7 +0.2
carbon source D,L-Malic Acid (C) +0.7 -0.5 -0.2 -1.8 -0.2
nitrogen source NAG (N); with MOPS +0.3 -0.3 +0.1 -2.2 +0.2
carbon source L-Lysine (C) -0.6 +0.2 +0.3 -2.0 +0.2
carbon source Xanthosine (C) +1.2 -1.3 -0.4 -0.6 -0.5
carbon source p-Coumaric 2 mM (C) +0.7 -1.0 +0.3 -1.1 -0.5
stress Betaine (C)(N); with MOPS; with chloride +0.7 -0.5 -0.1 -0.7 -1.0
carbon source acetate 30 mM (C) +0.2 -1.3 -0.9 +0.7 +0.0
carbon source caffeic 2 mM (C) +0.6 -0.9 -0.1 -1.4 +0.5
carbon source 4-Aminobutyric (C) +1.0 +0.0 -0.6 -1.0 -0.6
pH Growth at pH9 and (C) Trisodium citrate +0.4 -0.0 +0.3 -2.2 +0.6
stress Betaine (C)(N); with MOPS; with chloride +1.5 -0.2 -0.2 -1.2 -0.8
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 +0.6 +0.2 -1.7 +0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.8 -0.7 +1.1 +0.1
carbon source L-Valine 10 mM (C) +0.6 +0.4 -0.5 -1.2 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.4 -1.0 -0.7 +0.6 +0.3
carbon source L-Carnitine (C) +1.0 +0.3 -0.1 +0.4 -1.5
carbon source L-Carnitine (C) +0.6 +0.1 -1.0 -0.4 +0.9
carbon source p-Coumaric (C) 5 mM +0.7 -1.7 +1.2 +1.1 -0.4
carbon source p-Coumaric (C) 5 mM -0.1 -1.3 +1.4 +0.7 +0.2
carbon source p-Coumaric (C) 5 mM +0.4 -1.6 +1.4 +0.3 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.7 +0.2 -0.6 +1.3 +0.2
carbon source p-Coumaric (C) 5 mM +0.8 -1.2 +1.2 +0.6 +0.6
stress Betaine (C)(N); with MOPS; with chloride +1.5 +0.5 -0.7 +0.2 +0.7
carbon source Ferulic Acid (C) 1.5 mM +0.4 -0.3 +0.9 +1.2 +0.5
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