Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS17185 and PFLU_RS17190 are separated by 31 nucleotidesPFLU_RS17190 and PFLU_RS17195 overlap by 4 nucleotidesPFLU_RS17195 and PFLU_RS17200 are separated by 3 nucleotidesPFLU_RS17200 and PFLU_RS17205 are separated by 109 nucleotides PFLU_RS17185: PFLU_RS17185 - AMP-binding protein, at 3,906,218 to 3,907,921 _RS17185 PFLU_RS17190: PFLU_RS17190 - acetyl-CoA C-acetyltransferase, at 3,907,953 to 3,909,251 _RS17190 PFLU_RS17195: PFLU_RS17195 - acyl dehydratase, at 3,909,248 to 3,910,138 _RS17195 PFLU_RS17200: PFLU_RS17200 - 3-oxoacyl-ACP reductase, at 3,910,142 to 3,911,485 _RS17200 PFLU_RS17205: PFLU_RS17205 - acyl-CoA dehydrogenase, at 3,911,595 to 3,914,120 _RS17205
Group Condition PFLU_RS17185 PFLU_RS17190 PFLU_RS17195 PFLU_RS17200 PFLU_RS17205
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 -1.6 -0.2 -0.4 -0.4
stress L-Glutamine (C)(N); with MOPS; with chloride -0.2 -0.5 -2.0 -0.2 -0.1
pH Growth at pH9 and (C) Trisodium citrate -0.7 -1.3 -0.7 -0.2 -0.3
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.9 -0.9 -0.5 -0.7
carbon source L-Ornithine 10 mM (C) +0.1 -0.5 -2.1 -0.2 -0.3
pH Growth at pH8 and (C) Trisodium citrate -0.7 -0.9 -1.2 +0.1 -0.3
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.8 -0.7 -1.1 +0.1 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -1.4 -1.0 -0.1 -0.4
stress Betaine (C)(N); with MOPS; with chloride -0.4 -1.1 -1.1 +0.2 -0.4
carbon source 4-Aminobutyric (C) -0.8 +0.2 -1.6 -0.3 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -0.1 -0.6 -1.2 -0.4
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.4 -0.5 -0.9 -0.4 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.7 -0.8 -0.3 -0.6
stress Betaine (C)(N); with TAPS; with chloride +0.4 -0.3 -1.7 -0.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -0.1 -1.1 +0.2 -0.5
carbon source L-Carnitine (C) +0.1 +0.2 -2.4 +0.2 -0.1
stress L-Glutamine (C)(N); with TAPS; with chloride -0.6 -1.5 +0.2 +0.0 -0.2
carbon source Trisodium citrate (C) +0.2 -0.2 -1.9 +0.1 -0.0
carbon source p-Coumaric (C) 5 mM -0.3 -0.2 -1.8 +0.4 +0.2
temperature Growth at 30C; with MOPS +0.4 -0.4 -1.2 -0.5 +0.0
carbon source Shikimic Acid (C) +0.4 +0.5 -2.2 +0.1 +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 -1.2 -0.3 +0.2 -0.4
nitrogen source NAG (N); with MOPS -0.3 -0.9 +0.8 -0.2 -0.3
stress Betaine (C)(N); with TAPS; with chloride +0.5 -0.7 +0.6 -0.5 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.9 +1.1 +0.1 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.1 -0.8 +0.8 +0.5 -0.1
carbon source D,L-Malic Acid (C) -0.2 -0.7 +1.1 +0.3 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.4 +0.2 +0.9 -0.2 -0.7
stress Betaine (C)(N); with MOPS; with chloride +0.4 -0.7 +1.3 -0.2 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 +1.2 +0.6 -0.0 -0.4
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