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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16760 and PFLU_RS16765 are separated by 110 nucleotides
PFLU_RS16765 and PFLU_RS16770 are separated by 37 nucleotides
PFLU_RS16770 and PFLU_RS16775 are separated by 143 nucleotides
PFLU_RS16775 and PFLU_RS16780 are separated by 154 nucleotides
PFLU_RS16760: PFLU_RS16760 - DMT family transporter, at 3,802,720 to 3,803,715
_RS16760
PFLU_RS16765: PFLU_RS16765 - GNAT family N-acetyltransferase, at 3,803,826 to 3,804,746
_RS16765
PFLU_RS16770: PFLU_RS16770 - MFS transporter, at 3,804,784 to 3,806,187
_RS16770
PFLU_RS16775: PFLU_RS16775 - GNAT family N-acetyltransferase, at 3,806,331 to 3,806,861
_RS16775
PFLU_RS16780: PFLU_RS16780 - glycine betaine/L-proline transporter ProP, at 3,807,016 to 3,808,518
_RS16780
Group
Condition
PFLU
_RS16760
PFLU
_RS16765
PFLU
_RS16770
PFLU
_RS16775
PFLU
_RS16780
carbon source
D-Glucuronic 10 mM (C)
-0.1
-0.6
-3.7
-0.6
+0.0
stress
Betaine (C)(N); with MOPS; with chloride
-0.3
+0.1
+0.1
-0.3
-3.6
stress
Betaine (C)(N); with MOPS; with chloride
-0.4
-0.0
+0.3
+0.1
-3.9
carbon source
D-Glucuronic 10 mM (C)
+0.2
-0.3
-3.5
-0.2
+0.0
carbon source
D-Glucuronic 10 mM (C)
+0.2
-0.5
-3.2
-0.1
-0.0
stress
Betaine (C)(N); with MOPS; with chloride
-0.1
+0.3
+0.2
-0.3
-3.7
stress
Betaine (C)(N); with MOPS; with chloride
-0.3
+0.4
+0.2
+0.1
-3.8
stress
Betaine (C)(N); with MOPS; with chloride
-0.1
+0.2
+0.1
+0.6
-4.0
stress
Betaine (C)(N); with MOPS; with chloride
+0.0
+0.2
+0.3
-0.1
-3.6
stress
Betaine (C)(N); with TAPS; with chloride
-0.0
-0.5
+0.2
-0.4
-2.4
stress
Betaine (C)(N); with MOPS; with chloride
+0.2
+0.1
-0.3
+0.5
-3.5
stress
Betaine (C)(N); with MOPS; with chloride
-0.3
+0.4
+0.1
+0.5
-3.5
carbon source
D-Glucuronic (C)
-0.1
-0.2
-2.7
+0.2
-0.2
stress
Betaine (C)(N); with MOPS; with chloride
+0.1
+0.4
+0.3
+0.4
-3.7
stress
Betaine (C)(N); with TAPS; with chloride
-0.6
+0.0
+0.0
+0.3
-2.2
stress
Betaine (C)(N); with TAPS; with chloride
-0.0
+0.2
+0.0
+0.0
-2.7
stress
Betaine (C)(N); with MOPS; with chloride
+0.2
-0.1
+0.3
+0.5
-3.2
stress
Glucose (C) and Glycine betaine (N); with MOPS; with chloride
-0.2
-0.1
+0.1
+0.4
-2.3
stress
Betaine (C)(N); with MOPS; with chloride
-0.3
+0.1
+0.6
+0.7
-3.3
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.2
+0.1
+0.1
+0.4
-2.3
stress
Glucose (C) and Glycine betaine (N); with MOPS; with chloride
+0.2
-0.2
+0.0
+0.4
-2.3
carbon source
D-Glucuronic (C)
+0.2
+0.0
-2.5
+0.3
+0.1
stress
Glucose (C) and Glycine betaine (N); with MOPS; with chloride
+0.2
-0.1
+0.1
+0.3
-2.3
stress
Betaine (C)(N); with TAPS; with chloride
+0.4
-0.2
+0.4
-0.2
-2.2
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.2
+0.2
+0.1
+0.4
-2.1
stress
Betaine (C)(N); with TAPS; with chloride
+0.5
-0.1
+0.1
+0.4
-2.6
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.0
+0.3
+0.3
+0.4
-2.5
stress
Betaine (C)(N); with MOPS; with chloride
+0.1
+0.4
+0.3
+0.9
-3.2
stress
Glucose (C) and Betaine (N); with MOPS; with chloride
-0.0
-0.1
+0.2
+0.8
-1.9
stress
Betaine (C)(N); with TAPS; with chloride
+0.3
-0.0
+0.2
+0.9
-2.3
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